RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CD97P48960 835 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 BTN3A2P78410 334 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 FADDQ13158 208 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 DOC2BQ14184 412 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 SHISA5Q8N114 240 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 OR4K5Q8NGD3 323 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 TEFMQ96QE5 360 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 RBCK1Q9BYM8 510 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 MYNNQ9NPC7 610 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 A6NIN4 97 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 FAM183AA6NL82 134 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 H0Y8X5 98 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 B4GALT2O60909 372 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 NFATC1O95644 943 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 TSPAN19P0C672 248 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 ITGB7P26010 798 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 NTSP30990 170 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 GPR4P46093 362 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 PNCKQ6P2M8 343 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 CCBE1Q6UXH8 406 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF730Q6ZMV8 503 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 C16orf62Q7Z3J2 963 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 COMTD1Q86VU5 262 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 LINC01555Q8NAE3 123 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 SYT14Q8NB59 555 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 RGMAQ96B86 450 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 CNDP2Q96KP4 475 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 RAD9AQ99638 391 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 CDADC1Q9BWV3 514 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 SGPP1Q9BX95 441 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 GABARAPL1Q9H0R8 117 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 C6orf106Q9H6K1 298 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 MRPS30Q9NP92 439 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 SPHK1Q9NYA1 384 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 COMMD3Q9UBI1 195 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 ENTPD4Q9Y227 616 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 ATG4BQ9Y4P1 393 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 VPS13AQ96RL7 3174 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 HMGN4O00479 90 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 DSCR3O14972 297 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 CISD3P0C7P0 127 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 MC3RP41968 323 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 PPP5CP53041 499 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 RAB25P57735 213 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 CXCR4P61073 352 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 KCNC4Q03721 635 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 SLC30A6Q6NXT4 461 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 ZC3H14Q6PJT7 736 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 SLC46A3Q7Z3Q1 461 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 KRT73Q86Y46 540 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 FAM46DQ8NEK8 389 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 NLGN4YQ8NFZ3 816 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 OR9A2Q8NGT5 310 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 UBASH3BQ8TF42 649 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 DNAJA3Q96EY1 480 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 C11orf24Q96F05 449 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 OR52A5Q9H2C5 316 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 GLIPR2Q9H4G4 154 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 FBXL12Q9NXK8 326 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 CLCA2Q9UQC9 943 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 SEMA7AO75326 666 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 KAT7O95251 611 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 SDHBP21912 280 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 GDI1P31150 447 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 GJA8P48165 433 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 GPR68Q15743 365 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 RNASE12Q5GAN4 147 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 TJAP1Q5JTD0 557 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 C6orf132Q5T0Z8 1188 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 PDZD3Q86UT5 571 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 VRK2Q86Y07 508 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF513Q8N8E2 541 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 FAM46AQ96IP4 442 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 RPP25Q9BUL9 199 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 CHST8Q9H2A9 424 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 ADAP2Q9NPF8 381 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 PRSS16Q9NQE7 514 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 AGAP5A6NIR3 686 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 CCRL2O00421 344 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 PRKYO43930 277 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 GPX5O75715 221 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 PSMA1P25786 263 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 RPL3P39023 403 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 SIM1P81133 766 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 SLC9A5Q14940 896 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 SPHARQ15513 63 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 FCRLBQ6BAA4 426 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 KLHDC8AQ8IYD2 350 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 GPR151Q8TDV0 419 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF566Q969W8 418 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 TMED9Q9BVK6 235 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 MROQ9BYG7 248 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 RACGAP1Q9H0H5 632 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 HSPE1-MOB4S4R3N1 261 aa12.93□□□□□ -0.34
PRPF40B-209ENST00000548825 KLHL18O94889 574 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms