RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 SERPINI1Q99574 410 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 MRPL1Q9BYD6 325 aaKnown RBP13.16□□□□□ -0.3
TROAP-203ENST00000546735 ZFP64Q9NPA5 681 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 PSD3Q9NYI0 1048 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 Q9UFV3 132 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 DMGDHQ9UI17 866 aaKnown RBP13.16□□□□□ -0.3
TROAP-203ENST00000546735 PCTPQ9UKL6 214 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 BOKQ9UMX3 212 aaPredicted RBP13.16□□□□□ -0.3
TROAP-203ENST00000546735 OR6C76A6NM76 312 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 POC1B-GALNT4F8VUJ3 575 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 PPP6CO00743 305 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 SUSD5O60279 629 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 INHBAP08476 426 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 RBP1P09455 135 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 TSPAN8P19075 237 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 PIK3R1P27986 724 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 MAGEA12P43365 314 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 FBXW4P57775 412 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 TRAF3Q13114 568 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 NTRK2Q16620 822 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 GALNT12Q8IXK2 581 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
TROAP-203ENST00000546735 PRR22Q8IZ63 422 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 TAGAPQ8N103 731 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 LRRC25Q8N386 305 aaPredicted RBP13.15□□□□□ -0.3
TROAP-203ENST00000546735 ZNF441Q8N8Z8 693 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 OR4F6Q8NGB9 312 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 IFT81Q8WYA0 676 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 DIO2Q92813 273 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.3
TROAP-203ENST00000546735 DOHHQ9BU89 302 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 CXorf21Q9HAI6 301 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 FARSBQ9NSD9 589 aaKnown RBP13.15□□□□□ -0.3
TROAP-203ENST00000546735 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 MTRF1LQ9UGC7 380 aaKnown RBP13.15□□□□□ -0.3
TROAP-203ENST00000546735 POLQO75417 2590 aa13.15□□□□□ -0.3
TROAP-203ENST00000546735 STX16-NPEPL1H3BU86 382 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 STX16O14662 325 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 HCN1O60741 890 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 WDR1O75083 606 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 SMIM24O75264 130 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 SEMA3DO95025 777 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 HOXD4P09016 255 aaPredicted RBP13.14□□□□□ -0.31
TROAP-203ENST00000546735 CAPN3P20807 821 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 NT5EP21589 574 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 GALNSP34059 522 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 ZFP36L2P47974 494 aaKnown RBP13.14□□□□□ -0.31
TROAP-203ENST00000546735 XKP51811 444 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 CDH13P55290 713 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 SNTB1Q13884 538 aaKnown RBP13.14□□□□□ -0.31
TROAP-203ENST00000546735 CCNYL2Q5T2Q4 361 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 HLA-DQA1Q5Y7H0 255 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 METTL2BQ6P1Q9 378 aaKnown RBP13.14□□□□□ -0.31
TROAP-203ENST00000546735 MILR1Q7Z6M3 343 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 MMP21Q8N119 569 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 ZNF615Q8N8J6 731 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 NOA1Q8NC60 698 aaKnown RBP13.14□□□□□ -0.31
TROAP-203ENST00000546735 OR4K14Q8NGD5 310 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 ISL2Q96A47 359 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 NTMT1Q9BV86 223 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 FUT8Q9BYC5 575 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 OR10A5Q9H207 317 aa13.14□□□□□ -0.31
TROAP-203ENST00000546735 KDM4EB2RXH2 506 aaPredicted RBP13.13□□□□□ -0.31
TROAP-203ENST00000546735 TRIM49D1C9J1S8 452 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 RPS17P08708 135 aaKnown RBP13.13□□□□□ -0.31
TROAP-203ENST00000546735 SBK3P0C264 359 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 CPMP14384 443 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 GDF1P27539 372 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 ECHS1P30084 290 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 DLX5P56178 289 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 WNT3P56703 355 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 FUT7Q11130 342 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 IFT88Q13099 833 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 TMEM198Q66K66 360 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 DESI1Q6ICB0 168 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 FAM111BQ6SJ93 734 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 SEM1Q6ZVN7 128 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
TROAP-203ENST00000546735 RELL1Q8IUW5 271 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 DND1Q8IYX4 353 aaKnown RBP13.13□□□□□ -0.31
TROAP-203ENST00000546735 METTL4Q8N3J2 472 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 LIX1Q8N485 282 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 SIMC1Q8NDZ2 872 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 NEIL3Q8TAT5 605 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 DCAKDQ8WVC6 231 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 HBEGFQ99075 208 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 ZNF559Q9BR84 538 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 ELOVL6Q9H5J4 265 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 ACKR4Q9NPB9 350 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 SLC12A4Q9UP95 1085 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 DTX4Q9Y2E6 619 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 NPFFR2Q9Y5X5 522 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 TEP1Q99973 2627 aaKnown RBP13.13□□□□□ -0.31
TROAP-203ENST00000546735 DNAJC13O75165 2243 aa13.13□□□□□ -0.31
TROAP-203ENST00000546735 AKAP9Q99996 3911 aa13.12□□□□□ -0.31
TROAP-203ENST00000546735 HCFC1P51610 2035 aa13.12□□□□□ -0.31
TROAP-203ENST00000546735 DCHS2Q6V1P9 2916 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms