RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 HNRNPA1L2Q32P51 320 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ZNF658BQ4V348 819 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 C6orf183Q5T699 404 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 C18orf63Q68DL7 685 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ZNF793Q6ZN11 406 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TUBA1AQ71U36 451 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 GET4Q7L5D6 327 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 RD3Q7Z3Z2 195 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 NRARPQ7Z6K4 114 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 AKAP14Q86UN6 197 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ATCAYQ86WG3 371 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SLC9A6Q92581 669 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 KAT2AQ92830 837 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 PDXPQ96GD0 296 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ART5Q96L15 291 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 BBS4Q96RK4 519 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SPATA9Q9BWV2 254 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 C6orf106Q9H6K1 298 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 CAPN10Q9HC96 672 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 BRWD1Q9NSI6 2320 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 CPSF4LA6NMK7 179 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 MID1O15344 667 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ERI3O43414 337 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SLC35G4P0C7Q5 338 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 AVPR1BP47901 424 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 PCYT1AP49585 367 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SEC13P55735 322 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SFSWAPQ12872 951 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 HEPACAMQ14CZ8 416 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SPHARQ15513 63 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ATAT1Q5SQI0 421 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TYW3Q6IPR3 259 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ZNF770Q6IQ21 691 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 PGBD2Q6P3X8 592 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 USP30Q70CQ3 517 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TMEM145Q8NBT3 493 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 GATAD2BQ8WXI9 593 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SUSD6Q92537 303 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TOX2Q96NM4 488 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 FNDC11Q9BVV2 318 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 MS4A8Q9BY19 250 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 GLIPR2Q9H4G4 154 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 PLCXD1Q9NUJ7 323 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 REV1Q9UBZ9 1251 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 GPC6Q9Y625 555 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 MDC1Q14676 2089 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 CAPN5O15484 640 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 NDUFS4O43181 175 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 CDRT1O95170 752 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 OXSR1O95747 527 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ALOX5P09917 674 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 KELP23276 732 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 MMP11P24347 488 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 LIMS1P48059 325 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 RAB15P59190 212 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 COPZ1P61923 177 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 GINS1Q14691 196 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 WSCD2Q2TBF2 565 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 RSBN1Q5VWQ0 802 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TMEM53Q6P2H8 277 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 ABI3BPQ7Z7G0 1075 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 LHFPL3Q86UP9 236 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 PDZD3Q86UT5 571 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 DCUN1D3Q8IWE4 304 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 NLGN4YQ8NFZ3 816 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 OR4K5Q8NGD3 323 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TRNT1Q96Q11 434 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SYNPO2LQ9H987 977 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 FKBP14Q9NWM8 211 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SPIN1Q9Y657 262 aaPredicted RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 KIAA1671Q9BY89 1806 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 MYL12BO14950 172 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 OSMP13725 252 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 CAMK1Q14012 370 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ELAVL3Q14576 367 aaKnown RBP12.91□□□□□ -0.34
BNIP3-202ENST00000540159 SNAPC1Q16533 368 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
BNIP3-202ENST00000540159 OR4N5Q8IXE1 308 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 POP5Q969H6 163 aaKnown RBP12.91□□□□□ -0.34
BNIP3-202ENST00000540159 CXorf40BQ96DE9 158 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 SLC35G5Q96KT7 338 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 MMP28Q9H239 520 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 DDX28Q9NUL7 540 aaKnown RBP12.91□□□□□ -0.34
BNIP3-202ENST00000540159 AHSPQ9NZD4 102 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 DKK3Q9UBP4 350 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 A0A1W2PP55 124 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ADH1CP00326 375 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 GNRH1P01148 92 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 HMGN2P05204 90 aaKnown RBP12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ITGB7P26010 798 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 CCR8P51685 355 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 CSNK2BP67870 215 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 CDK3Q00526 305 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ZNF33BQ06732 778 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 LTB4RQ15722 352 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 BAK1Q16611 211 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 FAM78AQ5JUQ0 283 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms