RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CD97P48960 835 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 TEKQ02763 1124 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 DUSP2Q05923 314 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 OXA1LQ15070 435 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 GPR19Q15760 415 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 TBCEQ15813 527 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 C18orf63Q68DL7 685 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF425Q6IV72 752 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 TMEM92Q6UXU6 159 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 USP30Q70CQ3 517 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 CCDC103Q8IW40 242 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 MFSD4AQ8N468 514 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 DNAJC22Q8N4W6 341 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 XAGE5Q8WWM1 108 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 RPL3LQ92901 407 aaKnown RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 MYDGFQ969H8 173 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 SLC38A4Q969I6 547 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 GTPBP3Q969Y2 492 aaKnown RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 CNRIP1Q96F85 164 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 OTUB1Q96FW1 271 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 TREX2Q9BQ50 279 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 FAIM2Q9BWQ8 316 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 MROQ9BYG7 248 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 OR51I1Q9H343 314 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 FKBP14Q9NWM8 211 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 KCND3Q9UK17 655 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 FBXW2Q9UKT8 454 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 HCN4Q9Y3Q4 1203 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 CLCA1A8K7I4 914 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 FAM227AF5H4B4 570 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 HOXC4P09017 264 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 ACADMP11310 421 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 C21orf33P30042 268 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 NFATC4Q14934 902 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 TRIM16LQ309B1 348 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 TMEM236Q5W0B7 351 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 KIAA1324Q6UXG2 1013 aaKnown RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 OLIG3Q7RTU3 272 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 SUN3Q8TAQ9 357 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 ASB12Q8WXK4 309 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 SLIRPQ9GZT3 109 aaKnown RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 TMEM168Q9H0V1 697 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 ZCCHC3Q9NUD5 404 aaKnown RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 OR6C2Q9NZP2 312 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 OSGIN1Q9UJX0 560 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 SCN3AQ9NY46 2000 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 EFCAB9A8MZ26 197 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 BOLA2-SMG1P6H3BVE0 249 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 BTN3A3O00478 584 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 SLC28A2O43868 658 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 CCNB2O95067 398 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 AIFM1O95831 613 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 GASTP01350 101 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 CDK1P06493 297 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 C8orf89P0DMQ9 161 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 PORP16435 677 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 NDUFV2P19404 249 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 CBLP22681 906 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 LIPAP38571 399 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 IDH2P48735 452 aaKnown RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 PRKAG1P54619 331 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 SNRPNP63162 240 aaKnown RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 RELAQ04206 551 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 TCTN3Q6NUS6 607 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 DGLUCYQ7Z3D6 616 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 RBM45Q8IUH3 476 aaKnown RBP12.63□□□□□ -0.39
VPS33B-202ENST00000535906 CCDC116Q8IYX3 515 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 DEPDC4Q8N2C3 294 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 MFSD9Q8NBP5 474 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 AQP11Q8NBQ7 271 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 DENND6BQ8NEG7 585 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 OR4D11Q8NGI4 311 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 PROX1Q92786 737 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 GGHQ92820 318 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 ZHX1-C8orf76Q96EF9 292 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 SLC35G5Q96KT7 338 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 COL21A1Q96P44 957 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 BBS4Q96RK4 519 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 PSD2Q9BQI7 771 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 AMBNQ9NP70 447 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 KLF15Q9UIH9 416 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 DAPK2Q9UIK4 370 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 SLC6A14Q9UN76 642 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 DOLKQ9UPQ8 538 aa12.63□□□□□ -0.39
VPS33B-202ENST00000535906 TRBV4-1A0A0J9YWV2 114 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 BMP4P12644 408 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 GABRB1P18505 474 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 NTSP30990 170 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ACTR1BP42025 376 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 KCNJ5P48544 419 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ACTR1AP61163 376 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 INAQ16352 499 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF770Q6IQ21 691 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 KCT2Q8NC54 265 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 UTP15Q8TED0 518 aaKnown RBP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 WDR92Q96MX6 357 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 YIPF4Q9BSR8 244 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms