RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GATAD1Q8WUU5 269 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 TMED6Q8WW62 240 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 RXFP2Q8WXD0 754 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 MR1Q95460 341 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 HMCESQ96FZ2 354 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 TUBB2BQ9BVA1 445 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 C1QTNF7Q9BXJ2 289 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 UCK2Q9BZX2 261 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 IL25Q9H293 177 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 PLEKHF2Q9H8W4 249 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 ZBTB20Q9HC78 741 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 APMAPQ9HDC9 416 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 ELOVL2Q9NXB9 296 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 ZNF224Q9NZL3 707 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 RASAL2Q9UJF2 1139 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 KCNS2Q9ULS6 477 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 PCDHA7Q9UN72 937 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 AMDHD2Q9Y303 409 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 PCDHGB1Q9Y5G3 927 aa4.1□□□□□ -1.75
ECHDC1-223ENST00000534442 A0A1W2PPQ1 181 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 OR5K3A6NET4 321 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CHMP2AO43633 222 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 LDB3O75112 727 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CPNE6O95741 557 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 OLFM2O95897 454 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 OR2T7P0C7T2 308 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 MBL2P11226 248 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 UGT1A4P22310 534 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 AZGP1P25311 298 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CA5AP35218 305 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 KRT2P35908 639 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 PRKCIP41743 596 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 ZNF81P51508 661 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 ZNF75DP51815 510 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 EMC2Q15006 297 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CST6Q15828 149 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CALCRLQ16602 461 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 C6orf136Q5SQH8 315 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SPATA19Q7Z5L4 167 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 PTAR1Q7Z6K3 402 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 ACOT1Q86TX2 421 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 PARGQ86W56 976 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SNX32Q86XE0 403 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 TMEM219Q86XT9 240 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 MFN1Q8IWA4 741 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 RNF113BQ8IZP6 322 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CLYBLQ8N0X4 340 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 MOSPD2Q8NHP6 518 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 TM9SF4Q92544 642 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 NR4A3Q92570 626 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CORO2AQ92828 525 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 EXT2Q93063 718 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 WBP2Q969T9 261 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SLAMF9Q96A28 289 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 C18orf25Q96B23 403 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SPSB1Q96BD6 273 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 MTBPQ96DY7 904 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CEP170P1Q96L14 293 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 ZNF48Q96MX3 618 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 MUS81Q96NY9 551 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 OR1F2PQ96R84 312 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 RUFY1Q96T51 708 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 RIT2Q99578 217 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 FNDC11Q9BVV2 318 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SHARPINQ9H0F6 387 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 C2orf40Q9H1Z8 148 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 LRMDAQ9H2I8 198 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 TCEAL2Q9H3H9 227 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 MYNNQ9NPC7 610 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 RBM28Q9NW13 759 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SMARCAL1Q9NZC9 954 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 COQ3Q9NZJ6 369 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SPASTQ9UBP0 616 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 SIX4Q9UIU6 781 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 APPL1Q9UKG1 709 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 TNNQ9UQP3 1299 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 OR2W1Q9Y3N9 320 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 NFS1Q9Y697 457 aa4.09□□□□□ -1.75
ECHDC1-223ENST00000534442 CADP27708 2225 aa4.09□□□□□ -1.76
ECHDC1-223ENST00000534442 IGLV5-37A0A075B6J1 123 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 CD8B2A6NJW9 211 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 DVL1O14640 695 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 SLC31A1O15431 190 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 HMMRO75330 724 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 SLU7O95391 586 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 PMS2P2O95744 297 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 GBAP04062 536 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 RAB40ALP0C0E4 278 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 CALM1P0DP23 149 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 CALM2P0DP24 149 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 CALM3P0DP25 149 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 HLA-DOBP13765 273 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 PDGFRAP16234 1089 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 CR1P17927 2039 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 TYMPP19971 482 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 MPZP25189 248 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 BMXP51813 675 aa4.08□□□□□ -1.76
ECHDC1-223ENST00000534442 CAPZA1P52907 286 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms