RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 KLHL20Q9Y2M5 609 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 XIRP2A4UGR9 3374 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 TP53P04637 393 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-226ENST00000533820 PCSK2P16519 638 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 SLAMF1Q13291 335 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF770Q6IQ21 691 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-226ENST00000533820 FAM131AQ6UXB0 335 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 VN1R2Q8NFZ6 395 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 GRPEL2Q8TAA5 225 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 LRRC20Q8TCA0 184 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 XAGE5Q8WWM1 108 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 SLC6A18Q96N87 628 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 TM9SF2Q99805 663 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ZDHHC4Q9NPG8 344 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ASF1AQ9Y294 204 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 CD72P21854 359 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 RFX2P48378 723 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 PRKAG1P54619 331 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF79Q15937 498 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 NXPE4Q6UWF7 544 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 USP30Q70CQ3 517 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 TRIM48Q8IWZ4 208 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 LAS2Q8IYD9 372 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 NECTIN4Q96NY8 510 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 C17orf62Q9BQA9 187 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 EFCAB11Q9BUY7 163 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 TAPBPLQ9BX59 468 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 REV1Q9UBZ9 1251 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ANHXE9PGG2 379 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 PITPNM1O00562 1244 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 MYL12BO14950 172 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 OR7A10O76100 309 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 SCG5P05408 212 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 ELAVL4P26378 380 aaKnown RBP18.33■□□□□ 0.53
CAPN1-226ENST00000533820 DGKGP49619 791 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 HNRNPA0Q13151 305 aaKnown RBP18.33■□□□□ 0.53
CAPN1-226ENST00000533820 C6orf132Q5T0Z8 1188 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 OR2G6Q5TZ20 316 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 RAET1GQ6H3X3 334 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 ERAP2Q6P179 960 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 CACUL1Q86Y37 369 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 SYT14Q8NB59 555 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 SLC7A13Q8TCU3 470 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 TIFAQ96CG3 184 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 TMEM80Q96HE8 168 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 MYNNQ9NPC7 610 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 WASH6PQ9NQA3 447 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 CNOT2Q9NZN8 540 aaKnown RBP18.33■□□□□ 0.53
CAPN1-226ENST00000533820 TRPC4Q9UBN4 977 aa18.33■□□□□ 0.53
CAPN1-226ENST00000533820 SH3D21A4FU49 640 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 OSMP13725 252 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 PTNP21246 168 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 TIE1P35590 1138 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 HMGA2P52926 109 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 MAPK12P53778 367 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 KRR1Q13601 381 aaKnown RBP18.33■□□□□ 0.52
CAPN1-226ENST00000533820 SYPL1Q16563 259 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 TBRG1Q3YBR2 411 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 COMTD1Q86VU5 262 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 OR5AR1Q8NGP9 310 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 OR9A1PQ8NGU1 263 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 IRF7Q92985 503 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 C1QTNF7Q9BXJ2 289 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 GPR52Q9Y2T5 361 aa18.33■□□□□ 0.52
CAPN1-226ENST00000533820 PPM1DO15297 605 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 SLC28A2O43868 658 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 PRKYO43930 277 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 NME6O75414 186 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-226ENST00000533820 ALDH1A1P00352 501 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 IL7P13232 177 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 PSMB5P28074 263 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 CSTF2P33240 577 aaKnown RBP eCLIP18.32■□□□□ 0.52
CAPN1-226ENST00000533820 CRYBB2P43320 205 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 RORCP51449 518 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 PDE7AQ13946 482 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 TEAD2Q15562 447 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 VN1R5Q7Z5H4 357 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 UBQLNLQ8IYU4 475 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 ADGRF3Q8IZF5 1079 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 UBASH3BQ8TF42 649 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 SEC14L3Q9UDX4 400 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 MAPRE3Q9UPY8 281 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 V9GYH0 126 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 GLOD5A6NK44 160 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 NTN1O95631 604 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 H1F0P07305 194 aaKnown RBP18.32■□□□□ 0.52
CAPN1-226ENST00000533820 NNMTP40261 264 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 ATAT1Q5SQI0 421 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 ZNF544Q6NX49 715 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 TECPR1Q7Z6L1 1165 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 CXorf40BQ96DE9 158 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 PHOX2BQ99453 314 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 SCPEP1Q9HB40 452 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 ASAH2Q9NR71 780 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 IL36AQ9UHA7 158 aa18.32■□□□□ 0.52
CAPN1-226ENST00000533820 PCYT1BQ9Y5K3 369 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-226ENST00000533820 SPIN1Q9Y657 262 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-226ENST00000533820 HEPACAM2A8MVW5 462 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 B4GALT2O60909 372 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 SYN1P17600 705 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms