RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF550Q7Z398 422 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 VN1R5Q7Z5H4 357 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 BTLAQ7Z6A9 289 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 GRAMD2AQ8IUY3 354 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 ACOT4Q8N9L9 421 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 BBOF1Q8ND07 529 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 OR1J4Q8NGS1 313 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 ANKRD7Q92527 254 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 SERPINB12Q96P63 405 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 SLC39A3Q9BRY0 314 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 AMBRA1Q9C0C7 1298 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 XAB2Q9HCS7 855 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 SNX15Q9NRS6 342 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 ELOVL5Q9NYP7 299 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 CLCF1Q9UBD9 225 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 MAPRE3Q9UPY8 281 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 A8MV72 311 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 C16orf97H3BN30 126 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 CDH16O75309 829 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 CRHP06850 196 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 ALOX15P16050 662 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 ATP5A1P25705 553 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 VPS41P49754 854 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 HNMTP50135 292 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 SLC37A1P57057 533 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 ZNF267Q14586 743 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 TRIP13Q15645 432 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 PPP1R3AQ16821 1122 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 KCTD19Q17RG1 926 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 KRTAP24-1Q3LI83 254 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 ANKRD22Q5VYY1 191 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 RAD9BQ6WBX8 426 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 ZNF793Q6ZN11 406 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 TXLNBQ8N3L3 684 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 CNEP1R1Q8N9A8 125 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 DOK4Q8TEW6 326 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 TP53INP1Q96A56 240 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 PELOQ9BRX2 385 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 TBCDQ9BTW9 1192 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 PSD3Q9NYI0 1048 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 ZKSCAN5Q9Y2L8 839 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 ROS1P08922 2347 aa14.36□□□□□ -0.11
PDLIM7-210ENST00000503827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 C2orf92A0A1B0GVN3 265 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 WIPF1O43516 503 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 CCDC175P0C221 793 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 GABRB3P28472 473 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 IDUAP35475 653 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 GDF5P43026 501 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 KCNJ5P48544 419 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 NRG3P56975 720 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 CDKL1Q00532 357 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 SETDB1Q15047 1291 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 SPRED3Q2MJR0 410 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 KBTBD12Q3ZCT8 623 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 HLA-DQA1Q5Y7H0 255 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 OR2A2Q6IF42 318 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 ADNP2Q6IQ32 1131 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 ZNF474Q6S9Z5 364 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 ZNF704Q6ZNC4 412 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 P4HA3Q7Z4N8 544 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 TRIM42Q8IWZ5 723 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 ST13P4Q8IZP2 240 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 ZNF611Q8N823 705 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 OR14L1PQ8NHC6 308 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 STARD4Q96DR4 205 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 ZBED6CLQ96FA7 236 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 TRMT61AQ96FX7 289 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 PGM2Q96G03 612 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 PDLIM5Q96HC4 596 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 KRT12Q99456 494 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 RPF2Q9H7B2 306 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 PRM3Q9NNZ6 103 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 WWOXQ9NZC7 414 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 IKZF3Q9UKT9 509 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 CAPN6Q9Y6Q1 641 aa14.35□□□□□ -0.11
PDLIM7-210ENST00000503827 LRRC14BA6NHZ5 514 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 GOLGA8MH3BSY2 632 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 OR10H2O60403 315 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 AHSGP02765 367 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 HIST1H1TP22492 207 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 CCKARP32238 428 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 PGGT1BP53609 377 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 RPS4XP62701 263 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 AP5B1Q2VPB7 878 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 BEX5Q5H9J7 111 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 VWA1Q6PCB0 445 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 ANGPTL8Q6UXH0 198 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 SH2D5Q6ZV89 423 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 UBE3DQ7Z6J8 389 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 MCUQ8NE86 351 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 TANKQ92844 425 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 RIT1Q92963 219 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 CAVIN3Q969G5 261 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 VPS39Q96JC1 886 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 G6PC3Q9BUM1 346 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 OPN3Q9H1Y3 402 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 METTL7AQ9H8H3 244 aa14.34□□□□□ -0.11
PDLIM7-210ENST00000503827 MS4A12Q9NXJ0 267 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms