RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 NTRK2Q16620 822 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 TECRLQ5HYJ1 363 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 KLC3Q6P597 504 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 SPNS3Q6ZMD2 512 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 SEM1Q6ZVN7 128 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 CLYBLQ8N0X4 340 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 PTGR2Q8N8N7 351 aaPredicted RBP11.21□□□□□ -0.61
VPS16-208ENST00000487461 OR52B6Q8NGF0 335 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 PHF21BQ96EK2 531 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 JSRP1Q96MG2 331 aaPredicted RBP11.21□□□□□ -0.61
VPS16-208ENST00000487461 ZNF559Q9BR84 538 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 LRRC1Q9BTT6 524 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 VPS11Q9H270 941 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 SLC6A15Q9H2J7 730 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 CXorf21Q9HAI6 301 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 NINJ2Q9NZG7 142 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 KCNN3Q9UGI6 736 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 C2orf92A0A1B0GVN3 265 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 ANKRD33BA6NCL7 494 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 TRIM3O75382 744 aaPredicted RBP11.2□□□□□ -0.62
VPS16-208ENST00000487461 KLK1P06870 262 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 CT62P0C5K7 136 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 GABRA1P14867 456 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 SERPINB8P50452 374 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 FBXW4P57775 412 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 FUT7Q11130 342 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 CES4AQ5XG92 561 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 BICRALQ6AI39 1079 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 METTL2BQ6P1Q9 378 aaKnown RBP11.2□□□□□ -0.62
VPS16-208ENST00000487461 NUDT13Q86X67 352 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 TAGAPQ8N103 731 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 ZNF615Q8N8J6 731 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 NEIL3Q8TAT5 605 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 ATP6V1E2Q96A05 226 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 TP53INP1Q96A56 240 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 NSUN5Q96P11 429 aaKnown RBP11.2□□□□□ -0.62
VPS16-208ENST00000487461 SERPINI1Q99574 410 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 DOHHQ9BU89 302 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 NTMT1Q9BV86 223 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 ACSS3Q9H6R3 686 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 WDR41Q9HAD4 459 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 ZBTB26Q9HCK0 441 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 RYDENQ9NUL5 291 aaKnown RBP11.2□□□□□ -0.62
VPS16-208ENST00000487461 TEX10Q9NXF1 929 aaPredicted RBP11.2□□□□□ -0.62
VPS16-208ENST00000487461 QPCTLQ9NXS2 382 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.2□□□□□ -0.62
VPS16-208ENST00000487461 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
VPS16-208ENST00000487461 CELSR1Q9NYQ6 3014 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 SEMA3DO95025 777 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 ACSL3O95573 720 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 RBP1P09455 135 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 S1PR1P21453 382 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 PIK3R1P27986 724 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 PHBP35232 272 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 ARL1P40616 181 aaPredicted RBP11.19□□□□□ -0.62
VPS16-208ENST00000487461 XKP51811 444 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 CCNG1P51959 295 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 TRAF3Q13114 568 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 MYBPHQ13203 477 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 SNTB1Q13884 538 aaKnown RBP11.19□□□□□ -0.62
VPS16-208ENST00000487461 SLC25A35Q3KQZ1 300 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 RIPPLY2Q5TAB7 128 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 FRG2Q64ET8 278 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 TMEM198Q66K66 360 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 OR52E8Q6IFG1 317 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 ARSKQ6UWY0 536 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 WDR53Q7Z5U6 358 aaPredicted RBP11.19□□□□□ -0.62
VPS16-208ENST00000487461 ULK2Q8IYT8 1036 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 OR4K14Q8NGD5 310 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 SPPL2AQ8TCT8 520 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 SLC44A1Q8WWI5 657 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 NRGNQ92686 78 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 DIO2Q92813 273 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 ADIPOR1Q96A54 375 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 FRG2BQ96QU4 278 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 MRPL1Q9BYD6 325 aaKnown RBP11.19□□□□□ -0.62
VPS16-208ENST00000487461 OR10A5Q9H207 317 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 PCTPQ9UKL6 214 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 L3MBTL1Q9Y468 752 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 PCDHGB3Q9Y5G1 929 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 NPFFR2Q9Y5X5 522 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 NCKAP5O14513 1909 aa11.19□□□□□ -0.62
VPS16-208ENST00000487461 A0A1B0GTL3 188 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 CAPN14A8MX76 684 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 AHRRA9YTQ3 701 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 KDM4EB2RXH2 506 aaPredicted RBP11.18□□□□□ -0.62
VPS16-208ENST00000487461 STX16-NPEPL1H3BU86 382 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 PPP6CO00743 305 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 STX16O14662 325 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 TP53I11O14683 189 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 TRAPPC6AO75865 159 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 CPMP14384 443 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 NT5EP21589 574 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 GDF1P27539 372 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 MAGEA12P43365 314 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 WNT3P56703 355 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 DUSP8Q13202 625 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 SGO1Q5FBB7 561 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 CCNYL2Q5T2Q4 361 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms