RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 IMP3Q9NV31 184 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TAS2R7Q9NYW3 318 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 KCND3Q9UK17 655 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 MAP4K5Q9Y4K4 846 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 PCDHB9Q9Y5E1 797 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 HRH3Q9Y5N1 445 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CACNG2Q9Y698 323 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ZFP37Q9Y6Q3 630 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 RNF215Q9Y6U7 377 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 C2orf92A0A1B0GVN3 265 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 PIPSLA2A3N6 862 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 GPR171O14626 319 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 HRO43593 1189 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SLC19A2O60779 497 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SEMA7AO75326 666 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 TOXO94900 526 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ETHE1O95571 254 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 LALBAP00709 142 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 PROS1P07225 676 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ANXA4P09525 319 aaPredicted RBP10.1□□□□□ -0.79
CCDC171-208ENST00000486641 JUPP14923 745 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SDHBP21912 280 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ACRV1P26436 265 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 HLA-FP30511 346 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 CBX5P45973 191 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SLC6A12P48065 614 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 RAB8AP61006 207 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ZNF33BQ06732 778 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 DSC1Q08554 894 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 NFATC2Q13469 925 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 GRM7Q14831 915 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SPIN4Q56A73 249 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 MARCH9Q86YJ5 346 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ANKRD53Q8N9V6 530 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 BEST4Q8NFU0 473 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 OR52N2Q8NGI0 321 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 OR2T4Q8NH00 348 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 NEIL3Q8TAT5 605 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 NPLOC4Q8TAT6 608 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ST8SIA2Q92186 375 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 PTP4A1Q93096 173 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 OTULINQ96BN8 352 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 C11orf24Q96F05 449 aaPredicted RBP10.1□□□□□ -0.79
CCDC171-208ENST00000486641 OR2M2Q96R28 347 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SYT17Q9BSW7 474 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 NLNQ9BYT8 704 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ATG10Q9H0Y0 220 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SYNDIG1Q9H7V2 258 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 KCTD5Q9NXV2 234 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 KIF25Q9UIL4 384 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ADAM30Q9UKF2 790 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 MGAT4BQ9UQ53 548 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 NINQ8N4C6 2090 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 MEIKINA0A087WXM9 373 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 F5H5T6 163 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 M0R233 179 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 KCNJ13O60928 360 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 C6orf47O95873 294 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 IFNA14P01570 189 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 IGLV3-27P01718 113 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 TCRBP04435 133 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 FCER2P06734 321 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 OR12D1P0DN82 309 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ELAVL4P26378 380 aaKnown RBP10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ACLYP53396 1101 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 BCL2L1Q07817 233 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ST3GAL2Q16842 350 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 XKR6Q5GH73 641 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 DCST1Q5T197 706 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ACSM5Q6NUN0 579 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 LINGO4Q6UY18 593 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 MACC1Q6ZN28 852 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 FAM92BQ6ZTR7 304 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SHFQ7M4L6 423 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 KRT74Q7RTS7 529 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ARIH2OSQ8N7S6 290 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 OR5AK3PQ8NH89 298 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ARHGAP9Q9BRR9 750 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 SAP130Q9H0E3 1048 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 FBXO44Q9H4M3 255 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 TMEM38AQ9H6F2 299 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ISYNA1Q9NPH2 558 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 IL26Q9NPH9 171 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 ENAMQ9NRM1 1142 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 HCN3Q9P1Z3 774 aa10.1□□□□□ -0.79
CCDC171-208ENST00000486641 POLR2AP24928 1970 aaKnown RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 GLYATL1P3A0A0U1RQE8 302 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 TMEM129A0AVI4 362 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 SLC22A23A1A5C7 686 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 G3V3Q6 166 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 LGALS8O00214 317 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 RFXAPO00287 272 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 RNASET2O00584 256 aaKnown RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 GABRPO00591 440 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 DVL2O14641 736 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 EEF1E1O43324 174 aaKnown RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 F2P00734 622 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 PCBP3P57721 371 aaKnown RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 RPS24P62847 133 aaKnown RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 UAP1L1Q3KQV9 507 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms