RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 FAM120BQ96EK7 910 aaKnown RBP4.32□□□□□ -1.72
SSR1-207ENST00000479485 CDCA5Q96FF9 252 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 EEF2KMTQ96G04 330 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 PGAM5Q96HS1 289 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 IGSF21Q96ID5 467 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 TSNARE1Q96NA8 513 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 RDH12Q96NR8 316 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 OR2A14Q96R47 310 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 PKP2Q99959 881 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 SRSF8Q9BRL6 282 aaKnown RBP4.32□□□□□ -1.72
SSR1-207ENST00000479485 TMEM246Q9BRR3 403 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 MTG1Q9BT17 334 aaPredicted RBP4.32□□□□□ -1.72
SSR1-207ENST00000479485 PPA2Q9H2U2 334 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 SLCO5A1Q9H2Y9 848 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 COQ10BQ9H8M1 238 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 ZNF556Q9HAH1 456 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 MRPL47Q9HD33 250 aaKnown RBP4.32□□□□□ -1.72
SSR1-207ENST00000479485 PAK1IP1Q9NWT1 392 aaPredicted RBP4.32□□□□□ -1.72
SSR1-207ENST00000479485 RAB20Q9NX57 234 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 MTMR10Q9NXD2 777 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 BARHL2Q9NY43 387 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 MAP3K20Q9NYL2 800 aaKnown RBP4.32□□□□□ -1.72
SSR1-207ENST00000479485 SLC17A7Q9P2U7 560 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 MTRRQ9UBK8 725 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 ZNF580Q9UK33 172 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 FBXL2Q9UKC9 423 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 CPSF3Q9UKF6 684 aaKnown RBP4.32□□□□□ -1.72
SSR1-207ENST00000479485 KLHL20Q9Y2M5 609 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 MYH11P35749 1972 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 CCDC88AQ3V6T2 1871 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 USP54Q70EL1 1684 aa4.32□□□□□ -1.72
SSR1-207ENST00000479485 RNF103-CHMP3A0A140T963 221 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 A0A1W2PQ67 120 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TSPY2A6NKD2 308 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 C2orf81A6NN90 581 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 PP2D1A8MPX8 630 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 KPNA7A9QM74 516 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 E7ESA3 106 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 ZNF587BE7ETH6 402 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 ACOT8O14734 319 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 ZBTB5O15062 677 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 EIF3DO15371 548 aaKnown RBP eCLIP4.31□□□□□ -1.72
SSR1-207ENST00000479485 NMT2O60551 498 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 UGT2B11O75310 529 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 GLRA3O75311 464 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TGM6O95932 706 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 HLA-DRAP01903 254 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 SLC4A1P02730 911 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 NR3C1P04150 777 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TRIM49P0CI25 452 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TRIM49CP0CI26 452 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TSPY3P0CV98 308 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TSPY8P0CW00 308 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 IL7P13232 177 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 MYOD1P15172 320 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 HOXB6P17509 224 aaKnown RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 NCF2P19878 526 aaPredicted RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 CYP3A5P20815 502 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 EEF1B2P24534 225 aaKnown RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 ACADLP28330 430 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 CCKBRP32239 447 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 EIF2DP41214 584 aaKnown RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 MAGEA11P43364 429 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 SERPINH1P50454 418 aaKnown RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 ARSEP51690 589 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 MFAP3P55082 362 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 CLDN20P56880 219 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 GALK2Q01415 458 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TSPY1Q01534 308 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 RELQ04864 619 aaPredicted RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 MRPL28Q13084 256 aaKnown RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 STX5Q13190 355 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 IRF3Q14653 427 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 PDK2Q15119 407 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TAB1Q15750 504 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 SLC36A3Q495N2 470 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 DUSP28Q4G0W2 176 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 YIF1BQ5BJH7 314 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 SAMD4BQ5PRF9 694 aaKnown RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 ATAD3CQ5T2N8 411 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 LIN9Q5TKA1 542 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 LRRC38Q5VT99 294 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 GARNL3Q5VVW2 1013 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 PNCKQ6P2M8 343 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 PRMT9Q6P2P2 845 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 DCUN1D2Q6PH85 259 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 PAPD4Q6PIY7 484 aaKnown RBP4.31□□□□□ -1.72
SSR1-207ENST00000479485 BRAT1Q6PJG6 821 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TIFABQ6ZNK6 161 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 DENND5BQ6ZUT9 1274 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 ENOSF1Q7L5Y1 443 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 LINC00523Q86TU6 105 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 TLK2Q86UE8 772 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 AQP12AQ8IXF9 295 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 C1orf87Q8N0U7 546 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 SCML4Q8N228 414 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 DHRSXQ8N5I4 330 aa4.31□□□□□ -1.72
SSR1-207ENST00000479485 RBMXL3Q8N7X1 1067 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms