RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 NUF2Q9BZD4 464 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 TRIM4Q9C037 500 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 BRINP2Q9C0B6 783 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 EPN3Q9H201 632 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ACBD3Q9H3P7 528 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 CXorf21Q9HAI6 301 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 MYNNQ9NPC7 610 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 SLAMF7Q9NQ25 335 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 MIEF1Q9NQG6 463 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 THAP1Q9NVV9 213 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 COPS7AQ9UBW8 275 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ANAPC2Q9UJX6 822 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 PSME2Q9UL46 239 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 EXO1Q9UQ84 846 aaKnown RBP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 B3GNT3Q9Y2A9 372 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF780BQ9Y6R6 833 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 NUP210LQ5VU65 1888 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 MED13Q9UHV7 2174 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 OR5H15A6NDH6 313 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 TMEM200CA6NKL6 621 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 PYCARD-AS1I3L0S3 204 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 WWP2O00308 870 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 SUV39H1O43463 412 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 KALRNO60229 2985 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ITGA10O75578 1167 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ZFAND5O76080 213 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 SNUPNO95149 360 aaKnown RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 CLPSP04118 112 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 IGKV3-11P04433 115 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 BCKDHAP12694 445 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 CSNK2A2P19784 350 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 CASRP41180 1078 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 GSTM5P46439 218 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 MLLT10P55197 1068 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 MLF1P58340 268 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 RNF4P78317 190 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 MRPS35P82673 323 aaKnown RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 OCRLQ01968 901 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 OC90Q02509 493 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 BIKQ13323 160 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 TUBA3CQ13748 450 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 TLR1Q15399 786 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 SPRED3Q2MJR0 410 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 PRR30Q53SZ7 412 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 C6orf136Q5SQH8 315 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 C6orf163Q5TEZ5 329 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF468Q5VIY5 522 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 TUBA3EQ6PEY2 450 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 FAM111BQ6SJ93 734 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 RNF111Q6ZNA4 994 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 Q6ZS92 163 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 IKBIPQ70UQ0 350 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 TRIM42Q8IWZ5 723 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 LIX1Q8N485 282 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 C7orf57Q8NEG2 295 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 RAB3IL1Q8TBN0 382 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 DYDC1Q8WWB3 177 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF75CPQ92670 426 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 METTL2AQ96IZ6 378 aaKnown RBP9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ART5Q96L15 291 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF681Q96N22 645 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 GAL3ST4Q96RP7 486 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ANKRA2Q9H9E1 313 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 SLC35C2Q9NQQ7 365 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 GIMAP4Q9NUV9 329 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ABI3Q9P2A4 366 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 HAO1Q9UJM8 370 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 ENTPD4Q9Y227 616 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 TMED5Q9Y3A6 229 aa9.54□□□□□ -0.88
HDAC6-222ENST00000478095 BSNQ9UPA5 3926 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 SPTA1P02549 2419 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 GOLGA8QA0A0J9YX86 632 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 GOLGA8OA6NCC3 632 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 TTLL8A6PVC2 850 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 GOLGA8NF8WBI6 632 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 FCHO1O14526 889 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 OR2J2O76002 312 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 SORBS2O94875 1100 aaKnown RBP9.53□□□□□ -0.88
HDAC6-222ENST00000478095 ATP1B1P05026 303 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 PCSK2P16519 638 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 MAPK1P28482 360 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 SOX18P35713 384 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 CD96P40200 585 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 TNFSF10P50591 281 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 TLE1Q04724 770 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 PTGR1Q14914 329 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF169Q14929 603 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-222ENST00000478095 OR1C1Q15619 314 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 PRICKLE4Q2TBC4 344 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF385BQ569K4 471 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 IL23RQ5VWK5 629 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 HOMEZQ8IX15 550 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 LGI4Q8N135 537 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 VWA5B2Q8N398 1253 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 SIMC1Q8NDZ2 872 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 OR9A2Q8NGT5 310 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms