RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TBL1XO60907 577 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 TMCC2O75069 709 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 CREG1O75629 220 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 CEACAM4O75871 244 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 BEST1O76090 585 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 STK17BO94768 372 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 BMP10O95393 424 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 TFAP2AP05549 437 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 INHBAP08476 426 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 STSP08842 583 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 SELLP14151 372 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 DLSTP36957 453 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 CAMPP49913 170 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 SLC12A3P55017 1021 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 UBE2V1Q13404 147 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 CDH18Q13634 790 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 TRIM29Q14134 588 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 CRYMQ14894 314 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 KIR2DS3Q14952 304 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 MEP1AQ16819 746 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 PRR30Q53SZ7 412 aaPredicted RBP4.18□□□□□ -1.74
VPS50-214ENST00000477935 HYIQ5T013 277 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 ATP1A1-AS1Q5TC04 95 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 SLC35E4Q6ICL7 350 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 PACS1Q6VY07 963 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 MACC1Q6ZN28 852 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 ZNF534Q76KX8 674 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 ZNF720Q7Z2F6 126 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 UNC93AQ86WB7 457 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 WDR49Q8IV35 697 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 OR4D9Q8NGE8 314 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 SLC2A14Q8TDB8 520 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 UBE2Q2Q8WVN8 375 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 TM9SF4Q92544 642 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 PPP1R16AQ96I34 528 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 CCDC114Q96M63 670 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 C17orf77Q96MU5 243 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 RANBP9Q96S59 729 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 UBXN6Q9BZV1 441 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 CXXC4Q9H2H0 198 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 ZHX3Q9H4I2 956 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 ZNF696Q9H7X3 374 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 SCRT2Q9NQ03 307 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 SEPT11Q9NVA2 429 aaKnown RBP4.18□□□□□ -1.74
VPS50-214ENST00000477935 OGFRQ9NZT2 677 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 C5AR2Q9P296 337 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 RPH3AQ9Y2J0 694 aaPredicted RBP4.18□□□□□ -1.74
VPS50-214ENST00000477935 CMAHPQ9Y471 501 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 JRKLQ9Y4A0 524 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 NME7Q9Y5B8 376 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 TCHHQ07283 1943 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 NSD1Q96L73 2696 aaPredicted RBP4.18□□□□□ -1.74
VPS50-214ENST00000477935 SCN8AQ9UQD0 1980 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 ZNF233A6NK53 670 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 C15orf62A8K5M9 175 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 HHLA1C9JL84 531 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 POLR1CO15160 346 aaPredicted RBP4.17□□□□□ -1.74
VPS50-214ENST00000477935 IGHDP01880 384 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 MT-ND3P03897 115 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 LIPFP07098 398 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 P4HA1P13674 534 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 GABRB1P18505 474 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 HADHAP40939 763 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 NR2C2P49116 596 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 CCL11P51671 97 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 NDST1P52848 882 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 PLK1P53350 603 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 TLE4Q04727 773 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 PEX6Q13608 980 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 NR1D2Q14995 579 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 KRTAP27-1Q3LI81 207 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 NDUFAF5Q5TEU4 345 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 SEL1L3Q68CR1 1132 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 XKRXQ6PP77 449 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 CLEC20AQ6ZU45 233 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 ERN2Q76MJ5 926 aaKnown RBP4.17□□□□□ -1.74
VPS50-214ENST00000477935 SLC47A2Q86VL8 602 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 STPG4Q8N801 248 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 C4orf32Q8N8J7 132 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 BMPERQ8N8U9 685 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 RNF139Q8WU17 664 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 SYAP1Q96A49 352 aaPredicted RBP4.17□□□□□ -1.74
VPS50-214ENST00000477935 MOAP1Q96BY2 351 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 PGAM5Q96HS1 289 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 F2RL3Q96RI0 385 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 KLF6Q99612 283 aaPredicted RBP4.17□□□□□ -1.74
VPS50-214ENST00000477935 SLX1AQ9BQ83 275 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 ING2Q9H160 280 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 SEMA6AQ9H2E6 1030 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 TCEAL2Q9H3H9 227 aaPredicted RBP4.17□□□□□ -1.74
VPS50-214ENST00000477935 RAD21L1Q9H4I0 556 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 RDH14Q9HBH5 336 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 EIF2B3Q9NR50 452 aaKnown RBP4.17□□□□□ -1.74
VPS50-214ENST00000477935 ZNF624Q9P2J8 865 aaPredicted RBP4.17□□□□□ -1.74
VPS50-214ENST00000477935 FBXL17Q9UF56 701 aa4.17□□□□□ -1.74
VPS50-214ENST00000477935 PRRC2AP48634 2157 aaKnown RBP4.16□□□□□ -1.74
VPS50-214ENST00000477935 OR2M5A3KFT3 312 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 PP2D1A8MPX8 630 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 SMIM1B2RUZ4 78 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 C21orf140B9A014 251 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms