RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 DGKQP52824 942 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 RRADP55042 308 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 WNT3P56703 355 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 PLIN5Q00G26 463 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 AIMP2Q13155 320 aaKnown RBP14.78□□□□□ -0.04
COPS3-207ENST00000477299 PGS1Q32NB8 556 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 OR4F3Q6IEY1 312 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 PAOXQ6QHF9 649 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 ACAD11Q709F0 780 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 KBTBD2Q8IY47 623 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 LRRC25Q8N386 305 aaPredicted RBP14.78□□□□□ -0.04
COPS3-207ENST00000477299 CLEC1AQ8NC01 280 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 M1APQ8TC57 530 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 COQ8BQ96D53 544 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 BBS4Q96RK4 519 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 CCDC28BQ9BUN5 200 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 DPY30Q9C005 99 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 BRINP2Q9C0B6 783 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 ZNF552Q9H707 407 aaPredicted RBP14.78□□□□□ -0.04
COPS3-207ENST00000477299 PPIEQ9UNP9 301 aaKnown RBP14.78□□□□□ -0.04
COPS3-207ENST00000477299 PIEZO2Q9H5I5 2752 aa14.77□□□□□ -0.04
COPS3-207ENST00000477299 TRBV11-1A0A0K0K1C0 115 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 F10P00742 488 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 IGKV3-11P04433 115 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 ATP1B1P05026 303 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 ITGB2P05107 769 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 PRPS1L1P21108 318 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 DRD4P21917 467 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 NCBP2P52298 156 aaKnown RBP eCLIP14.77□□□□□ -0.05
COPS3-207ENST00000477299 SOX8P57073 446 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 LY6DQ14210 128 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 ZNF628Q5EBL2 1059 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 CPTPQ5TA50 214 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 MORN4Q8NDC4 146 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 OR7G2Q8NG99 324 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 OR1N1Q8NGS0 311 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 OR14A16Q8NHC5 309 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 CHMP6Q96FZ7 201 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 ABHD17AQ96GS6 310 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 AMDHD1Q96NU7 426 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 LHPPQ9H008 270 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 FAM107BQ9H098 131 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 MMP25Q9NPA2 562 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 GPR83Q9NYM4 423 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 PTGFRNQ9P2B2 879 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 RALYQ9UKM9 306 aaKnown RBP14.77□□□□□ -0.05
COPS3-207ENST00000477299 LHX6Q9UPM6 363 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 ENTPD4Q9Y227 616 aa14.77□□□□□ -0.05
COPS3-207ENST00000477299 PDPK1O15530 556 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 ZNF354AO60765 605 aaPredicted RBP14.76□□□□□ -0.05
COPS3-207ENST00000477299 SCN2BO60939 215 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 CBX7O95931 251 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 C1QCP02747 245 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 GPX3P22352 226 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 HPCAL1P37235 193 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 FRKP42685 505 aaPredicted RBP14.76□□□□□ -0.05
COPS3-207ENST00000477299 CDK9P50750 372 aaKnown RBP14.76□□□□□ -0.05
COPS3-207ENST00000477299 C21orf58P58505 322 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 MAP4K2Q12851 820 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 BIKQ13323 160 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 TERF2Q15554 542 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 EXT1Q16394 746 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 SPRED3Q2MJR0 410 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 COLEC12Q5KU26 742 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 SPANXN4Q5MJ08 99 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 LINC00696Q6ZRV3 163 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 ANKRD46Q86W74 232 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 FUNDC1Q8IVP5 155 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 GALNT12Q8IXK2 581 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 C9orf40Q8IXQ3 194 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 CLECL1Q8IZS7 167 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 C10orf82Q8WW14 230 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 DAZLQ92904 295 aaKnown RBP14.76□□□□□ -0.05
COPS3-207ENST00000477299 CTHRC1Q96CG8 243 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 MTERF3Q96E29 417 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 FBXL20Q96IG2 436 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 VPS50Q96JG6 964 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 MAGED4Q96JG8 741 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 RILPQ96NA2 401 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 ELAC2Q9BQ52 826 aaKnown RBP14.76□□□□□ -0.05
COPS3-207ENST00000477299 DUSP26Q9BV47 211 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 SEMA4CQ9C0C4 833 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 CDCP1Q9H5V8 836 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 CLMPQ9H6B4 373 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 ZNF639Q9UID6 485 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 DTX4Q9Y2E6 619 aa14.76□□□□□ -0.05
COPS3-207ENST00000477299 COPG1Q9Y678 874 aaKnown RBP14.76□□□□□ -0.05
COPS3-207ENST00000477299 EXPH5Q8NEV8 1989 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 GMNCA6NCL1 334 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 NCF2P19878 526 aaPredicted RBP14.75□□□□□ -0.05
COPS3-207ENST00000477299 GALNSP34059 522 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 MC3RP41968 323 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 CLCN2P51788 898 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 ARFIP2P53365 341 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 SLC37A1P57057 533 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 FUT7Q11130 342 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 HSPB3Q12988 150 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 MYBPC3Q14896 1274 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 RPS6KA2Q15349 733 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 FAM174BQ3ZCQ3 159 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms