RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TBCDQ9BTW9 1192 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 DEFB127Q9H1M4 99 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 LYRM4Q9HD34 91 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 EMC7Q9NPA0 242 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 DNAJC11Q9NVH1 559 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 OXSMQ9NWU1 459 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 MYOTQ9UBF9 498 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 ACAD8Q9UKU7 415 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 BOKQ9UMX3 212 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 RNF6Q9Y252 685 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 HCFC1P51610 2035 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 PCNX1Q96RV3 2341 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 LRIT2A6NDA9 550 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 FAM90A27PA6NNH2 459 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 KIAA1324LA8MWY0 1029 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-214ENST00000477152 C19orf84I3L1E1 186 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 HCN1O60741 890 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 OR2J2O76002 312 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 ELK3P41970 407 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 PAFAH1B1P43034 410 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 RPL21P46778 160 aaKnown RBP6.72□□□□□ -1.33
BRCA1-214ENST00000477152 AP5B1Q2VPB7 878 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 GXYLT1Q4G148 440 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 TMEM35AQ53FP2 167 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 CMPK2Q5EBM0 449 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 SULT1C3Q6IMI6 304 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF585AQ6P3V2 769 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 SBSNQ6UWP8 590 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 C3P1Q6ZMU1 363 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 LIX1Q8N485 282 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 ANKS4BQ8N8V4 417 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 SNX31Q8N9S9 440 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 ANKRD53Q8N9V6 530 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 ACBD4Q8NC06 268 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 OR2M7Q8NG81 312 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 MS4A6EQ96DS6 147 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 RBM18Q96H35 190 aaKnown RBP6.72□□□□□ -1.33
BRCA1-214ENST00000477152 MS4A14Q96JA4 679 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 KRT12Q99456 494 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 ALOXE3Q9BYJ1 711 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 GPR160Q9UJ42 338 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 DAPP1Q9UN19 280 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 PCDHGB3Q9Y5G1 929 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 NBPF19A0A087WUL8 3843 aa6.72□□□□□ -1.33
BRCA1-214ENST00000477152 NPEPPSL1A6NEC2 478 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 HSPB2A8KAH6 182 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 NPIPA2E9PIF3 369 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 NPIPA3F8WFD2 350 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 DVL2O14641 736 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 ADAM10O14672 748 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 STK16O75716 305 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 PDE9AO76083 593 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 GABRB3P28472 473 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 GCKP35557 465 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 GPR143P51810 404 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 ART1P52961 327 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 PLA2G16P53816 162 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 TIAL1Q01085 375 aaKnown RBP eCLIP6.71□□□□□ -1.33
BRCA1-214ENST00000477152 HSPB2Q16082 182 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 MPEG1Q2M385 716 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 XKR6Q5GH73 641 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 C6orf163Q5TEZ5 329 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 SLC22A10Q63ZE4 541 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 BICRALQ6AI39 1079 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 GPSM1Q86YR5 675 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 CMIPQ8IY22 773 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.71□□□□□ -1.33
BRCA1-214ENST00000477152 GOT1L1Q8NHS2 421 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-214ENST00000477152 DGAT2Q96PD7 388 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 TTTY12Q9BZ98 90 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 DERL2Q9GZP9 239 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 RHOJQ9H4E5 214 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 KLHL31Q9H511 634 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 ZDHHC11Q9H8X9 412 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 WDR41Q9HAD4 459 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 QPCTLQ9NXS2 382 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 CNIH4Q9P003 139 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 PHF11Q9UIL8 331 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 CHMP2BQ9UQN3 213 aa6.71□□□□□ -1.33
BRCA1-214ENST00000477152 TRGV5A0A0B4J1U4 118 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 A0A1B0GVC2 190 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 C17orf105B2RV13 164 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 CCDC188H7C350 402 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 GSTA4O15217 222 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 KLK8O60259 260 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 CDH16O75309 829 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 IGHG3P01860 377 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 F7P08709 466 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-214ENST00000477152 CPN2P22792 545 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-214ENST00000477152 RAP1GDS1P52306 607 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 ARFIP1P53367 373 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 LIM2P55344 173 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 NUP107P57740 925 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 PLIN5Q00G26 463 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 DR1Q01658 176 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 IRF8Q02556 426 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 TGFBIQ15582 683 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 PDK4Q16654 411 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 PPP1R3AQ16821 1122 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms