RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CYP2A7P20853 494 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 CBLP22681 906 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 MPZP25189 248 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 CD82P27701 267 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PSMB4P28070 264 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 EPHA2P29317 976 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SLC6A6P31641 620 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 USP8P40818 1118 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 CETN2P41208 172 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 FRKP42685 505 aaPredicted RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 RPL21P46778 160 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 RFX2P48378 723 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 KHKP50053 298 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SERPINH1P50454 418 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 NR0B1P51843 470 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 SMSP52788 366 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 DVL1P1P54792 670 aaPredicted RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 MFAP3P55082 362 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 GSDMDP57764 484 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 HNRNPKP61978 463 aaKnown RBP eCLIP2.15□□□□□ -2.07
CALD1-216ENST00000473714 HMGN5P82970 282 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 IL1RL1Q01638 556 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 CRYZQ08257 329 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 CETN1Q12798 172 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PPP1R8Q12972 351 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 LCP2Q13094 533 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PRKAA1Q13131 559 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 EIF3IQ13347 325 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 GTF2H2Q13888 395 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 ZNF234Q14588 700 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SLC39A14Q15043 492 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PDK1Q15118 436 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SGCBQ16585 318 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PHKG1Q16816 387 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 CTU2Q2VPK5 515 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 KRTAP24-1Q3LI83 254 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 FAM174BQ3ZCQ3 159 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SBK1Q52WX2 424 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 TDRD12Q587J7 1177 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 SYT14P1Q58G82 188 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 ASPHD1Q5U4P2 390 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 FAM46CQ5VWP2 391 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 TXNRD3NBQ6F5E7 133 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PRR27Q6MZM9 219 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 GTF2H2CQ6P1K8 395 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PLBD1Q6P4A8 553 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 FAM171BQ6P995 826 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 RHBDF2Q6PJF5 856 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PACS1Q6VY07 963 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 RAD9BQ6WBX8 426 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 TMPRSS11BQ86T26 416 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SLC9B2Q86UD5 537 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 LCA5Q86VQ0 697 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 ANKRD46Q86W74 232 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 NRROSQ86YC3 692 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 FOXRED2Q8IWF2 684 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 GPALPP1Q8IXQ4 340 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 LMNTD2Q8IXW0 634 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.15□□□□□ -2.07
CALD1-216ENST00000473714 BATF2Q8N1L9 274 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PGBD5Q8N414 524 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 METTL13Q8N6R0 699 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 RTL3Q8N8U3 475 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 CCNYQ8ND76 341 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 OR5R1Q8NH85 324 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 RNF128Q8TEB7 428 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 TMED6Q8WW62 240 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 TSACCQ96A04 125 aaPredicted RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 PDLIM5Q96HC4 596 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 ZNF560Q96MR9 790 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 NAP1L5Q96NT1 182 aaPredicted RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 SECISBP2Q96T21 854 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 C17orf62Q9BQA9 187 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 OSBPL8Q9BZF1 889 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 ZNF350Q9GZX5 532 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 DPH5Q9H2P9 285 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 MRPL44Q9H9J2 332 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 UBTD1Q9HAC8 227 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 TM9SF3Q9HD45 589 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 RAB9BQ9NP90 201 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 PPANQ9NQ55 473 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 GSN-AS1Q9NRJ2 163 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SERINC1Q9NRX5 453 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 ZBTB40Q9NUA8 1239 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 ZCCHC3Q9NUD5 404 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 OCIAD1Q9NX40 245 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.15□□□□□ -2.07
CALD1-216ENST00000473714 SLC12A6Q9UHW9 1150 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 SH3BGRL2Q9UJC5 107 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 AGO1Q9UL18 857 aaKnown RBP2.15□□□□□ -2.07
CALD1-216ENST00000473714 CCL26Q9Y258 94 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 NCKAP1Q9Y2A7 1128 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 EXOC6BQ9Y2D4 811 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 AP1M2Q9Y6Q5 423 aa2.15□□□□□ -2.07
CALD1-216ENST00000473714 A0A0A6YYC8 382 aaPredicted RBP2.14□□□□□ -2.07
CALD1-216ENST00000473714 A0A0U1RQJ8 604 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 A0A1B0GUH1 482 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 A0A1W2PPQ1 181 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 ARL5CA6NH57 179 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 ARHGAP42A6NI28 874 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms