RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 RCBTB2O95199 551 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 SERPINC1P01008 464 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 IGHV4-39P01824 125 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 APOA4P06727 396 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 CYP4B1P13584 511 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 POU2F1P14859 743 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 GYPEP15421 78 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 PPP3CBP16298 524 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 IGFBP5P24593 272 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 PSMB5P28074 263 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 APOBEC3AP31941 199 aaPredicted RBP5.3□□□□□ -1.56
NCL-208ENST00000466274 CD79BP40259 229 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 ARHGAP25P42331 645 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 KCNJ5P48544 419 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 FAM27E3Q08E93 113 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 HSPA14Q0VDF9 509 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 MPP3Q13368 585 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 DPYSL3Q14195 570 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 ITIH4Q14624 930 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 PTPRCAPQ14761 206 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 TMED2Q15363 201 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 TERF2Q15554 542 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 NRF1Q16656 503 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 ZNF750Q32MQ0 723 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 OPN5Q6U736 354 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 QSOX2Q6ZRP7 698 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 DNM1P46Q6ZS02 220 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 IL17RELQ6ZVW7 336 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 BZW1Q7L1Q6 419 aaKnown RBP5.3□□□□□ -1.56
NCL-208ENST00000466274 ADCK2Q7Z695 626 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 IPMKQ8NFU5 416 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 ZPLD1Q8TCW7 415 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.3□□□□□ -1.56
NCL-208ENST00000466274 AKAP1Q92667 903 aaKnown RBP eCLIP5.3□□□□□ -1.56
NCL-208ENST00000466274 LRRC45Q96CN5 670 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 PANX2Q96RD6 677 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 ACAT2Q9BWD1 397 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 MAK16Q9BXY0 300 aaKnown RBP5.3□□□□□ -1.56
NCL-208ENST00000466274 FAM129AQ9BZQ8 928 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 CHODLQ9H9P2 273 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 EML4Q9HC35 981 aaKnown RBP5.3□□□□□ -1.56
NCL-208ENST00000466274 TRMT1Q9NXH9 659 aaKnown RBP5.3□□□□□ -1.56
NCL-208ENST00000466274 TUBA8Q9NY65 449 aaPredicted RBP5.3□□□□□ -1.56
NCL-208ENST00000466274 SPATA7Q9P0W8 599 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 CIDEBQ9UHD4 219 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 PCYOX1Q9UHG3 505 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 IP6K2Q9UHH9 426 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 LIPT1Q9Y234 373 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 ATG4BQ9Y4P1 393 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 HEY1Q9Y5J3 304 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 SVEP1Q4LDE5 3571 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 CCDC88CQ9P219 2028 aa5.3□□□□□ -1.56
NCL-208ENST00000466274 ABCA1O95477 2261 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 IGHV4-30-2A0A087WSY4 118 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 TRBV5-4A0A0C4DH59 114 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 LRRC14BA6NHZ5 514 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 TMCO5BA8MYB1 307 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 PSMD12O00232 456 aaPredicted RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 SSX4O60224 188 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 NRP2O60462 931 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 RDH16O75452 317 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 MYO1DO94832 1006 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 LY86O95711 162 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 CD48P09326 243 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 IGHV4-31P0DP07 118 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 ZFXP17010 805 aaPredicted RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 IL1RNP18510 177 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 CHRM3P20309 590 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 HRH2P25021 359 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 LMO1P25800 156 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 UGT2B10P36537 528 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 HSD17B2P37059 387 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 SOX3P41225 446 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 RPL21P46778 160 aaKnown RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 TRPC1P48995 793 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 DNASE1L1P49184 302 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 NUDT6P53370 316 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 CSE1LP55060 971 aaKnown RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 ABATP80404 500 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 SLC25A11Q02978 314 aaKnown RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 PRDX1Q06830 199 aaKnown RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 CRYZQ08257 329 aaKnown RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 SLC10A2Q12908 348 aaPredicted RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 GRB7Q14451 532 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 HERC3Q15034 1050 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 FAM182AQ5T1J6 154 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 SLC22A10Q63ZE4 541 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 PACS1Q6VY07 963 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 HSDL2Q6YN16 418 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 LRRC25Q8N386 305 aaPredicted RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 NIPA2Q8N8Q9 360 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 C9orf106Q8NAJ2 232 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 CAMKVQ8NCB2 501 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 APCDD1LQ8NCL9 501 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 NFAM1Q8NET5 270 aaPredicted RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 OR10H5Q8NGA6 315 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 OR5L2Q8NGL0 311 aa5.29□□□□□ -1.56
NCL-208ENST00000466274 GABPB2Q8TAK5 448 aaPredicted RBP5.29□□□□□ -1.56
NCL-208ENST00000466274 NTN5Q8WTR8 489 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms