RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 UBE2TQ9NPD8 197 aaPredicted RBP3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 MAN2C1Q9NTJ4 1040 aa3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 GDAP2Q9NXN4 497 aa3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 IL17BQ9UHF5 180 aa3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 NOCTQ9UK39 431 aaKnown RBP3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 CPSF3Q9UKF6 684 aaKnown RBP3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 RPL26L1Q9UNX3 145 aaKnown RBP3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 PPP1R3CQ9UQK1 317 aa3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 WDR83OSQ9Y284 106 aa3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 PTPRJQ12913 1337 aa3.13□□□□□ -1.91
SSX2IP-204ENST00000459708 MYH9P35579 1960 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TP53BP1Q12888 1972 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 OTOFQ9HC10 1997 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 PCNX3Q9H6A9 2034 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 EDDM13A0A1B0GTR0 161 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 A0A1W2PPK0 400 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 A0A1W2PR80 420 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TCRBV21S2A2A0A5A6 115 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 MACROD2A1Z1Q3 448 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 SIGLEC16A6NMB1 481 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 LRRIQ3A6PVS8 624 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 HACD1B0YJ81 288 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 O00370 1275 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 ZNF263O14978 683 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 DCXO43602 365 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 SPOPO43791 374 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 FAM189A1O60320 539 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 MAGEC1O60732 1142 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 GLRA3O75311 464 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 PALMO75781 387 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 ATP5HO75947 161 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CDK2AP2O75956 126 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 SORBS2O94875 1100 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 NXPH2O95156 264 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 STBD1O95210 358 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 SEC24AO95486 1093 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CCNE2O96020 404 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 IL1BP01584 269 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 ZSCAN5DPP0CG00 497 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 MLNP12872 115 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 KCNE1P15382 129 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TNNI1P19237 187 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 IL11P20809 199 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CYP2A7P20853 494 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 ADSSP30520 456 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CSTF2P33240 577 aaKnown RBP eCLIP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 EPHX2P34913 555 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TCF7P36402 384 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CCR10P46092 362 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 LHX1P48742 406 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 NOP14P78316 857 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 RBP5P82980 135 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 DR1Q01658 176 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 GFPT1Q06210 699 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 IFFO1Q0D2I5 559 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 RALGDSQ12967 914 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CUL3Q13618 768 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TOMM20Q15388 145 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TAZQ16635 292 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 XKR4Q5GH76 650 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TFDP3Q5H9I0 405 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 SLC35D3Q5M8T2 416 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 LGSNQ5TDP6 509 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 DUPD1Q68J44 220 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 GPR139Q6DWJ6 353 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 UGT3A1Q6NUS8 523 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 C16orf54Q6UWD8 224 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 RGS9BPQ6ZS82 235 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 STRADAQ7RTN6 431 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 PRPF39Q86UA1 669 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 GTSCR1Q86UQ5 136 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 NELFCDQ8IXH7 590 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 MCOLN2Q8IZK6 566 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 LGI2Q8N0V4 545 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CHCHD4Q8N4Q1 142 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 POGLUT1Q8NBL1 392 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 SLC4A11Q8NBS3 891 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 OR10G8Q8NGN5 311 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 GATAD1Q8WUU5 269 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 ATL1Q8WXF7 558 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 KRT35Q92764 455 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 PEX13Q92968 403 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 SNF8Q96H20 258 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 FAM71F1Q96KD3 344 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 C4orf45Q96LM5 186 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 NSMCE3Q96MG7 304 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CFAP57Q96MR6 1250 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 NECTIN4Q96NY8 510 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 VAT1Q99536 393 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 CPNE1Q99829 537 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 PKP2Q99959 881 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 ZNF670Q9BS34 389 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 DESI2Q9BSY9 194 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 FTHL17Q9BXU8 183 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 DGCR6LQ9BY27 220 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 GCOM2Q9BZD3 368 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 POLR3FQ9H1D9 316 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 TLE6Q9H808 572 aa3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 RPF1Q9H9Y2 349 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-204ENST00000459708 RAVER2Q9HCJ3 691 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms