RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 KANSL1Q7Z3B3 1105 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 MACROD1Q9BQ69 325 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 TPSD1Q9BZJ3 242 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 KCNIP3Q9Y2W7 256 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 FBP2O00757 339 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 SDHDO14521 159 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 C1GALT1C1LP0DN25 315 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 NKPD1Q17RQ9 610 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 TECRLQ5HYJ1 363 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 OR4C11Q6IEV9 310 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 GID4Q8IVV7 300 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 CREB3L4Q8TEY5 395 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 PTBP2Q9UKA9 531 aaKnown RBP18.78■□□□□ 0.6
SNX27-204ENST00000458013 AP1M2Q9Y6Q5 423 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 NPIPA5A0A0B4J1W7 369 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 NPIPA7E9PJI5 369 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 PPP1R3DO95685 299 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 NPIPA8P0DM63 369 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 CTHP32929 405 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 ZNF791Q3KP31 576 aaPredicted RBP18.78■□□□□ 0.6
SNX27-204ENST00000458013 FAM205BPQ63HN1 556 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 AWAT2Q6E213 333 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 SLC27A4Q6P1M0 643 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 ZNF100Q8IYN0 542 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 HS3ST5Q8IZT8 346 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 PSD4Q8NDX1 1056 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 OR52B6Q8NGF0 335 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 A6NCN8 305 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 ZNF84P51523 738 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 DNAJB13P59910 316 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 SMAD2Q15796 467 aaKnown RBP18.78■□□□□ 0.6
SNX27-204ENST00000458013 CDHR3Q6ZTQ4 885 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 TAS1R3Q7RTX0 852 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 MROQ9BYG7 248 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 KLHL9Q9P2J3 617 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 SLC7A11Q9UPY5 501 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 BACE2Q9Y5Z0 518 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 HMX3A6NHT5 357 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 GCGRP47871 477 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 SHC2P98077 582 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 PLP2Q04941 152 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 LRR1Q96L50 414 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 NEDD4LQ96PU5 975 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 NPY6RQ99463 290 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 YTHDF1Q9BYJ9 559 aaKnown RBP18.78■□□□□ 0.6
SNX27-204ENST00000458013 GPR88Q9GZN0 384 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 A0A096LPI6 279 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 IFNGR1P15260 489 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 NCS1P62166 190 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 SIM1P81133 766 aaPredicted RBP18.77■□□□□ 0.6
SNX27-204ENST00000458013 CDCA2Q69YH5 1023 aaPredicted RBP18.77■□□□□ 0.6
SNX27-204ENST00000458013 SYT4Q9H2B2 425 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 DUOX1Q9NRD9 1551 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 FAM221BA6H8Z2 402 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 GRXCR2A6NFK2 248 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 RFPL2O75678 378 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 ALDOAP04075 364 aaKnown RBP18.77■□□□□ 0.6
SNX27-204ENST00000458013 HTR2BP41595 481 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 SHISA6Q6ZSJ9 500 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 WDR53Q7Z5U6 358 aaPredicted RBP18.77■□□□□ 0.6
SNX27-204ENST00000458013 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNX27-204ENST00000458013 DCAF4L2Q8NA75 395 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 OR4C15Q8NGM1 316 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 SORBS1Q9BX66 1292 aaKnown RBP18.77■□□□□ 0.6
SNX27-204ENST00000458013 SPHK2Q9NRA0 654 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 CAPNS1P04632 268 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 IL7P13232 177 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 SSTR4P31391 388 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 PON2Q15165 354 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 PLEKHS1Q5SXH7 462 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 HUS1BQ8NHY5 278 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 GPR62Q9BZJ7 368 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 SPATA6Q9NWH7 488 aaPredicted RBP18.77■□□□□ 0.6
SNX27-204ENST00000458013 PIGRP01833 764 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 GGT2P36268 569 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 FRKP42685 505 aaPredicted RBP18.77■□□□□ 0.6
SNX27-204ENST00000458013 ZER1Q7Z7L7 766 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 LINC00471Q8N535 108 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 SGCZQ96LD1 299 aa18.77■□□□□ 0.6
SNX27-204ENST00000458013 DRD5P21918 477 aa18.77■□□□□ 0.59
SNX27-204ENST00000458013 SOX4Q06945 474 aaPredicted RBP18.77■□□□□ 0.59
SNX27-204ENST00000458013 FRS2Q8WU20 508 aa18.77■□□□□ 0.59
SNX27-204ENST00000458013 TSNAXQ99598 290 aaKnown RBP18.77■□□□□ 0.59
SNX27-204ENST00000458013 PCDHGA8Q9Y5G5 932 aa18.77■□□□□ 0.59
SNX27-204ENST00000458013 KIF1AQ12756 1690 aa18.77■□□□□ 0.59
SNX27-204ENST00000458013 TUBA3CQ13748 450 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 CLCA4Q14CN2 919 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ALG10BQ5I7T1 473 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 LIPJQ5W064 366 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 TIFABQ6ZNK6 161 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 C6orf120Q7Z4R8 191 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ARL14Q8N4G2 192 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ZNF778Q96MU6 729 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 UHRF1Q96T88 793 aaPredicted RBP18.76■□□□□ 0.59
SNX27-204ENST00000458013 DPH7Q9BTV6 452 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 FAM124BQ9H5Z6 455 aaPredicted RBP18.76■□□□□ 0.59
SNX27-204ENST00000458013 ARMC1Q9NVT9 282 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ZNF225Q9UK10 706 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 SNED1Q8TER0 1413 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 FAAHO00519 579 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms