RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ACTR10Q9NZ32 417 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 SLC6A14Q9UN76 642 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ZNF780BQ9Y6R6 833 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 SPTBP11277 2137 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 PROM1O43490 865 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 DNAJB5O75953 348 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 CCDC159P0C7I6 412 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 ANXA8P13928 327 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 CTSEP14091 401 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 RHCEP18577 417 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 PSMB9P28065 219 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 MPIP34949 423 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 PPP1CAP62136 330 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 KCNC4Q03721 635 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 OCA2Q04671 838 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 PIN1Q13526 163 aaPredicted RBP11.11□□□□□ -0.63
VTA1-203ENST00000452973 SLC48A1Q6P1K1 146 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 OR4C15Q8NGM1 316 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 SLC22A18Q96BI1 424 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 TMEM74BQ9NUR3 256 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 GIMAP4Q9NUV9 329 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 HRASLS2Q9NWW9 162 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 RNF6Q9Y252 685 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 SEMA7AO75326 666 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 WBP4O75554 376 aaKnown RBP11.11□□□□□ -0.63
VTA1-203ENST00000452973 SEC14L2O76054 403 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 SOX14O95416 240 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 TNFP01375 233 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 MT-ND2P03891 347 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 IGHV4-34P06331 123 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 THEGLP0DJG4 465 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 CPN2P22792 545 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 GABARAPL2P60520 117 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 RPS15AP62244 130 aaKnown RBP11.11□□□□□ -0.63
VTA1-203ENST00000452973 C6orf132Q5T0Z8 1188 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 MRM1Q6IN84 353 aaKnown RBP11.11□□□□□ -0.63
VTA1-203ENST00000452973 FIGLAQ6QHK4 219 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 COMTD1Q86VU5 262 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 SIMC1Q8NDZ2 872 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 ASB12Q8WXK4 309 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 DNASE1L2Q92874 299 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 HRASLS5Q96KN8 279 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 FUNDC2Q9BWH2 189 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 OCEL1Q9H607 264 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 IMPAD1Q9NX62 359 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 EHD3Q9NZN3 535 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 ANKMY1Q9P2S6 941 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 CPNE7Q9UBL6 633 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 HCN4Q9Y3Q4 1203 aa11.11□□□□□ -0.63
VTA1-203ENST00000452973 OR10H3O60404 316 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 SERPINB7O75635 380 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 NR2F6P10588 404 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 ALDH4A1P30038 563 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 TGM3Q08188 693 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 BNIP3Q12983 259 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 TCTN3Q6NUS6 607 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 PRSS41Q7RTY9 318 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 FAM46DQ8NEK8 389 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 RORBQ92753 470 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 TRNAU1APQ9NX07 287 aaKnown RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 SELENONQ9NZV5 590 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 CA14Q9ULX7 337 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 A6NCN8 305 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 FRS3O43559 492 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 PDE9AO76083 593 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 HOXC4P09017 264 aaPredicted RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 CDK4P11802 303 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 CCNA2P20248 432 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 SLC35A2P78381 396 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 ELOAQ14241 798 aaKnown RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 FBXO43Q4G163 708 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 SLC30A8Q8IWU4 369 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 NUP43Q8NFH3 380 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 SLC37A2Q8TED4 501 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 ZG16BQ96DA0 208 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 CSF3RQ99062 836 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 TUBA1CQ9BQE3 449 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 ARMC7Q9H6L4 198 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 POLMQ9NP87 494 aaPredicted RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 POFUT2Q9Y2G5 429 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 MRPS2Q9Y399 296 aaKnown RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 B4DGG1 531 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 PRAMEF26H0Y7S4 382 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 TNFRSF10CO14798 259 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 RGS10O43665 173 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 NDUFS2O75306 463 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 CHRM4P08173 479 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 CTSKP43235 329 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 GSTM5P46439 218 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 LSSP48449 732 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 CRISP3P54108 245 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 GP2P55259 537 aaKnown RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 KIR2DS3Q14952 304 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 SEC23BQ15437 767 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 DEFB110Q30KQ9 67 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms