RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 SHOXO15266 292 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 CSO75390 466 aaKnown RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PRLP01236 227 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 TP53P04637 393 aaPredicted RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 SCG5P05408 212 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 IGFBP1P08833 259 aaPredicted RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 HLA-EP13747 358 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ANXA8P13928 327 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ENPP1P22413 925 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 HOXA6P31267 233 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PTPN5P54829 565 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 MESP2Q0VG99 397 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 RPA4Q13156 261 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 UGT8Q16880 541 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ZBTB37Q5TC79 503 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ALG1LQ6GMV1 187 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ERICH5Q6P6B1 374 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ZFP41Q8N8Y5 198 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 IL17RCQ8NAC3 791 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 OR4M2Q8NGB6 313 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 RIT1Q92963 219 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PEX13Q92968 403 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 LRIG1Q96JA1 1093 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 MTERF1Q99551 399 aaKnown RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 DOHHQ9BU89 302 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 DPCDQ9BVM2 203 aaPredicted RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 MIXL1Q9H2W2 232 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ANKRA2Q9H9E1 313 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 HCN2Q9UL51 889 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 MGAT4AQ9UM21 535 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 STUB1Q9UNE7 303 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 DHRS7Q9Y394 339 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 SPIN1Q9Y657 262 aaPredicted RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 KCNE2Q9Y6J6 123 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PRAMEF33A0A0G2JMD5 474 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PRR33A8MZF0 331 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 WASH3PC4AMC7 463 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ZNF670-ZNF695F2Z2N8 137 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 CASKO14936 926 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 KPNA5O15131 536 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 LYRM1O43325 122 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ORC5O43913 435 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PCDH7O60245 1069 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PRAMEF10O60809 474 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 SLC22A5O76082 557 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 LAMP1P11279 417 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ITPKAP23677 461 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 CSTF2P33240 577 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PTGER3P43115 390 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 SRP54P61011 504 aaKnown RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 RRAS2P62070 204 aaPredicted RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 SNTA1Q13424 505 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 TTLL9Q3SXZ7 439 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 FNDC3BQ53EP0 1204 aaKnown RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 LINGO4Q6UY18 593 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 COMMD7Q86VX2 200 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 NAGSQ8N159 534 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 GDPD1Q8N9F7 314 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 LKAAEAR1Q8TD35 194 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 CREB3L4Q8TEY5 395 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 TTC9Q92623 222 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 REPS1Q96D71 796 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 ZBED6CLQ96FA7 236 aaPredicted RBP7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PSKH2Q96QS6 385 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 TM9SF2Q99805 663 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 C1QTNF7Q9BXJ2 289 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 FOXQ1Q9C009 403 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 NIPAL2Q9H841 368 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 SEC14L4Q9UDX3 406 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PRKAB1Q9Y478 270 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PCDHB9Q9Y5E1 797 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 STON1Q9Y6Q2 735 aa7.71□□□□□ -1.18
LINC00954-202ENST00000449086 PIKFYVEQ9Y2I7 2098 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 HPGDSO60760 199 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 TOXO94900 526 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 GADD45GO95257 159 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 CD160O95971 181 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 EPOP01588 193 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 EBLN1P0CF75 366 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 HLA-DMAP28067 261 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 CRYBB2P43320 205 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 SEMG2Q02383 582 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 RPL6Q02878 288 aaKnown RBP7.7□□□□□ -1.18
LINC00954-202ENST00000449086 SUZ12Q15022 739 aaKnown RBP7.7□□□□□ -1.18
LINC00954-202ENST00000449086 ZMYND11Q15326 602 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 MICAQ29983 383 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 GLYR1Q49A26 553 aaPredicted RBP7.7□□□□□ -1.18
LINC00954-202ENST00000449086 BCL2L15Q5TBC7 163 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 NOXRED1Q6NXP6 359 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 C22orf39Q6P5X5 142 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 CNIH2Q6PI25 160 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 TRIM46Q7Z4K8 759 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 ZNF680Q8NEM1 530 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 OR6K2Q8NGY2 324 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 DNAJB8Q8NHS0 232 aa7.7□□□□□ -1.18
LINC00954-202ENST00000449086 AKAP1Q92667 903 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00954-202ENST00000449086 POP5Q969H6 163 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms