RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ZNF45	Q02386	682 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	FADD	Q13158	208 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	CDKN3	Q16667	212 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	PLAG1	Q6DJT9	500 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	C22orf39	Q6P5X5	142 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	SMARCD3	Q6STE5	483 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	COMTD1	Q86VU5	262 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF480	Q8WV37	535 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	PLD4	Q96BZ4	506 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	SCRN2	Q96FV2	425 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	TMEM169	Q96HH4	297 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	TMEM19	Q96HH6	336 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	HSPB11	Q9Y547	144 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	SCN8A	Q9UQD0	1980 aa		11.91	□□□□□ -0.5
DDR1-238	ENST00000446312	TRAV6	A0A075B6T7	132 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312		A0A0G2JMP0	313 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	TEX51	A0A1B0GUA7	166 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	WASH3P	C4AMC7	463 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ANHX	E9PGG2	379 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF197	O14709	1029 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	HPGDS	O60760	199 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	IFNA16	P05015	189 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ANXA8	P13928	327 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	MYL9	P24844	172 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ETV5	P41161	510 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	CTBP2	P56545	445 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF91	Q05481	1191 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ACSM5	Q6NUN0	579 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	PDZD3	Q86UT5	571 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	TCEAL4	Q96EI5	215 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	PIP5K1A	Q99755	562 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	GALNT9	Q9HCQ5	603 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	SLAMF7	Q9NQ25	335 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	TM7SF3	Q9NS93	570 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	CYB5R1	Q9UHQ9	305 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312		H0YC42	278 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	OR5F1	O95221	314 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	PDGFA	P04085	211 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	HOXB9	P17482	250 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	RPS3	P23396	243 aa	Known RBP eCLIP	11.9	□□□□□ -0.5	4e-7	■■■□□ 15.2
DDR1-238	ENST00000446312	RPL35	P42766	123 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	GSTM5	P46439	218 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	CLDN2	P57739	230 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	NTHL1	P78549	312 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	GINS1	Q14691	196 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	FCRLB	Q6BAA4	426 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	MED27	Q6P2C8	311 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ATCAY	Q86WG3	371 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	UBQLNL	Q8IYU4	475 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	OR4F15	Q8NGB8	312 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	OR6C4	Q8NGE1	309 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	OR52P1P	Q8NH57	321 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF461	Q8TAF7	563 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	AP2M1	Q96CW1	435 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	REPS1	Q96D71	796 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	HDHD2	Q9H0R4	259 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	SAV1	Q9H4B6	383 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	XKR8	Q9H6D3	395 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	DIABLO	Q9NR28	239 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	EMC3	Q9P0I2	261 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	SEC14L3	Q9UDX4	400 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	LSM7	Q9UK45	103 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	GMEB2	Q9UKD1	530 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	SSR3	Q9UNL2	185 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	ASF1A	Q9Y294	204 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC9A8	Q9Y2E8	581 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC45A1	Q9Y2W3	748 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	WNT6	Q9Y6F9	365 aa		11.9	□□□□□ -0.5
DDR1-238	ENST00000446312	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	C1orf226	A1L170	272 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312		H7BY64	318 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	CAT	P04040	527 aa	Known RBP	11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	MRPL19	P49406	292 aa	Known RBP	11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	GPR33	Q49SQ1	333 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	DCST1	Q5T197	706 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	SLC35F1	Q5T1Q4	408 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	CHST9	Q7L1S5	443 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	WDR20	Q8TBZ3	569 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	C16orf78	Q8WTQ4	265 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.9	□□□□□ -0.51	7e-7	■■□□□ 13.4
DDR1-238	ENST00000446312	COL26A1	Q96A83	441 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	PRAP1	Q96NZ9	151 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	EPYC	Q99645	322 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	PITX2	Q99697	317 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	REV1	Q9UBZ9	1251 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	MAFF	Q9ULX9	164 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	NDRG2	Q9UN36	371 aa	Known RBP	11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	SCN10A	Q9Y5Y9	1956 aa		11.9	□□□□□ -0.51
DDR1-238	ENST00000446312	C8G	P07360	202 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	FUT1	P19526	365 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	CEL	P19835	753 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	RORC	P51449	518 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	SMS	P52788	366 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	MVD	P53602	400 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	MESP2	Q0VG99	397 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	BTBD16	Q32M84	506 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	KRT74	Q7RTS7	529 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	YIPF7	Q8N8F6	280 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	L3MBTL4	Q8NA19	623 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	BEST4	Q8NFU0	473 aa		11.89	□□□□□ -0.51

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