RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CHCHD2Q9Y6H1 151 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CACNA1CQ13936 2221 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 EFCAB8A8MWE9 144 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SUPT3HB4E1H0 165 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TRIM3O75382 744 aaPredicted RBP11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SUPT3HO75486 399 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ATE1O95260 518 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CD1DP15813 335 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NAGAP17050 411 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ENDOUP21128 410 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FPR1P21462 350 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DEKP35659 375 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ARL1P40616 181 aaPredicted RBP11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC37A1P57057 533 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RAB10P61026 200 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PPP2R2BQ00005 443 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CRYZQ08257 329 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GRTP1Q5TC63 336 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC30A6Q6NXT4 461 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZNF793Q6ZN11 406 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CAPN12Q6ZSI9 719 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NUP54Q7Z3B4 507 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 VN1R5Q7Z5H4 357 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 KLHL7Q8IXQ5 586 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SPATA6LQ8N4H0 392 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PDPRQ8NCN5 879 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR4K14Q8NGD5 310 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SPPL2AQ8TCT8 520 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ATP6V1E2Q96A05 226 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RILPQ96NA2 401 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TMEM79Q9BSE2 394 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SFXN3Q9BWM7 321 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ACTR8Q9H981 624 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SH2D2AQ9NP31 389 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SNX12Q9UMY4 172 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MTO1Q9Y2Z2 717 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PSAT1Q9Y617 370 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ADGRG4Q8IZF6 3080 aa11.24□□□□□ -0.61
HLA-DQB3-203ENST00000425319 UQCRHLA0A096LP55 91 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CCDC189A1A4V9 331 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MBD3L4A6NDZ8 208 aaPredicted RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MBD3L3A6NE82 208 aaPredicted RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MBD3L5A6NJ08 208 aaPredicted RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 H0Y3Z8 333 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CCDC188H7C350 402 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZNF354AO60765 605 aaPredicted RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CBR3O75828 277 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GSTA2P09210 222 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FAM58BPP0C7Q3 252 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NR2F6P10588 404 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 BMP7P18075 431 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CRABP2P29373 138 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 HOXC12P31275 282 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GP5P40197 560 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CASP3P42574 277 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PIK3CGP48736 1102 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZNF136P52737 540 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RPS13P62277 151 aaKnown RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 KBTBD12Q3ZCT8 623 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR52E8Q6IFG1 317 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GRHL2Q6ISB3 625 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 AAGABQ6PD74 315 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PAGE2Q7Z2X7 111 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 P4HA3Q7Z4N8 544 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CCDC91Q7Z6B0 441 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 UBE3DQ7Z6J8 389 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NUDT13Q86X67 352 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GAS2L3Q86XJ1 694 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CTAGE3PQ8IX95 158 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GALNT12Q8IXK2 581 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC35F6Q8N357 371 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LRRN4CLQ8ND94 238 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR7G1Q8NGA0 311 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR14L1PQ8NHC6 308 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MBD3L2Q8NHZ7 208 aaPredicted RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SMPDL3BQ92485 455 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NTNG2Q96CW9 530 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TMEM41AQ96HV5 264 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GNRHR2Q96P88 292 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TRIM31Q9BZY9 425 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DLL4Q9NR61 685 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TEX10Q9NXF1 929 aaPredicted RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FETUBQ9UGM5 382 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 C15orf41Q9Y2V0 281 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC6A5Q9Y345 797 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TNPO3Q9Y5L0 923 aaKnown RBP11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CSMD1Q96PZ7 3565 aa11.23□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SH3D21A4FU49 640 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GOLGA6L10A6NI86 522 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LRRC3CA6NJW4 275 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GNB5O14775 395 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PHGDHO43175 533 aaKnown RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 UGDHO60701 494 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TBX6O95947 436 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 HEXAP06865 529 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CPN1P15169 458 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NT5EP21589 574 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 KRT20P35900 424 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms