RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 KLC3Q6P597 504 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 ARSKQ6UWY0 536 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 LIX1LQ8IVB5 337 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 ZZZ3Q8IYH5 903 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 ULK2Q8IYT8 1036 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 CENPLQ8N0S6 344 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-205ENST00000423214 NRGNQ92686 78 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 DIO2Q92813 273 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 ZDHHC18Q9NUE0 388 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 CPSF2Q9P2I0 782 aaKnown RBP14.85□□□□□ -0.03
COL18A1-205ENST00000423214 PRRC2AP48634 2157 aaKnown RBP14.85□□□□□ -0.03
COL18A1-205ENST00000423214 ABCA4P78363 2273 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 A0A0A6YYD5 115 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 CCDC189A1A4V9 331 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 H0YIV9 168 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 TP53I11O14683 189 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 TMPRSS11DO60235 418 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 EEDO75530 441 aaKnown RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 AIFM1O95831 613 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 MTHFD2P13995 350 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 PEX19P40855 299 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 ALDH18A1P54886 795 aaKnown RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 CUL3Q13618 768 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 GTF2H2Q13888 395 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 RPS6KA2Q15349 733 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 UAP1Q16222 522 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 UBAP2Q5T6F2 1119 aaKnown RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 MROH9Q5TGP6 573 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 TMEM198Q66K66 360 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 GTF2H2CQ6P1K8 395 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 GOLGA7Q7Z5G4 137 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 NOA1Q8NC60 698 aaKnown RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 ZNF717Q9BY31 904 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 POLDIP3Q9BY77 421 aaKnown RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 ACKR4Q9NPB9 350 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 SNX15Q9NRS6 342 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 DMGDHQ9UI17 866 aaKnown RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 CNOT11Q9UKZ1 510 aaKnown RBP14.84□□□□□ -0.03
COL18A1-205ENST00000423214 ASB4Q9Y574 426 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 PCDHGB3Q9Y5G1 929 aa14.84□□□□□ -0.03
COL18A1-205ENST00000423214 HRNRQ86YZ3 2850 aaPredicted RBP14.83□□□□□ -0.03
COL18A1-205ENST00000423214 C2orf92A0A1B0GVN3 265 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 LRRC14BA6NHZ5 514 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 DVL2O14641 736 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 BMP5P22003 454 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 PIK3R1P27986 724 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 SSTR4P31391 388 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 UQCRC1P31930 480 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 GALNSP34059 522 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 BSGP35613 385 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 KIR2DL3P43628 341 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 MASP1P48740 699 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 DLX5P56178 289 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 NRG3P56975 720 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 RPP38P78345 283 aaKnown RBP14.83□□□□□ -0.04
COL18A1-205ENST00000423214 ACAP2Q15057 778 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 MRM1Q6IN84 353 aaKnown RBP14.83□□□□□ -0.04
COL18A1-205ENST00000423214 GALNT12Q8IXK2 581 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 MMGT1Q8N4V1 131 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 NINJ1Q92982 152 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 HSPBAP1Q96EW2 488 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 GPATCH1Q9BRR8 931 aaKnown RBP14.83□□□□□ -0.04
COL18A1-205ENST00000423214 DDX31Q9H8H2 851 aaKnown RBP14.83□□□□□ -0.04
COL18A1-205ENST00000423214 IPPKQ9H8X2 491 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 PROK2Q9HC23 129 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 TNPO3Q9Y5L0 923 aaKnown RBP14.83□□□□□ -0.04
COL18A1-205ENST00000423214 MED12Q93074 2177 aa14.83□□□□□ -0.04
COL18A1-205ENST00000423214 A0A1W2PR48 441 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 TRAPPC6AO75865 159 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 GBAP04062 536 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 C2P06681 752 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 SLC35E2P0CK97 266 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 KRT15P19012 456 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 SERPINB8P50452 374 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 ASCL1P50553 236 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 IST1P53990 364 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 FBXW4P57775 412 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 DUSP8Q13202 625 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 PCBP2Q15366 365 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■■■■ 30.9
COL18A1-205ENST00000423214 TOMM20Q15388 145 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 ACSF3Q4G176 576 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-205ENST00000423214 LACC1Q8IV20 430 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 PM20D2Q8IYS1 436 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 RELL2Q8NC24 303 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-205ENST00000423214 IFT81Q8WYA0 676 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 ATP6V1E2Q96A05 226 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 RMND5BQ96G75 393 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-205ENST00000423214 RILPQ96NA2 401 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 SERPINI1Q99574 410 aa14.82□□□□□ -0.04
COL18A1-205ENST00000423214 MTRF1LQ9UGC7 380 aaKnown RBP14.82□□□□□ -0.04
COL18A1-205ENST00000423214 MED12LQ86YW9 2145 aa14.81□□□□□ -0.04
COL18A1-205ENST00000423214 A0A096LPK6 155 aa14.81□□□□□ -0.04
COL18A1-205ENST00000423214 FOXE1O00358 373 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-205ENST00000423214 TRIM3O75382 744 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-205ENST00000423214 CTAG2O75638 210 aa14.81□□□□□ -0.04
COL18A1-205ENST00000423214 SEMA3DO95025 777 aa14.81□□□□□ -0.04
COL18A1-205ENST00000423214 KLHL2O95198 593 aa14.81□□□□□ -0.04
COL18A1-205ENST00000423214 SIX3O95343 332 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-205ENST00000423214 CLDN9O95484 217 aa14.81□□□□□ -0.04
COL18A1-205ENST00000423214 TYK2P29597 1187 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms