RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 PLOD2O00469 737 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 EMC8O43402 210 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 CBFA2T2O43439 604 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 SMNDC1O75940 238 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTPA-213ENST00000419582 LRATO95237 230 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 TGM6O95932 706 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 RHOXF2BP0C7M4 288 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 DANCRP0C864 163 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 ZSCAN5DPP0CG00 497 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 GNAZP19086 355 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 CERS1P27544 350 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 GALNSP34059 522 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 ACVR1BP36896 505 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 SLC1A2P43004 574 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 TMED10P49755 219 aaKnown RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 LHX2P50458 406 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 VLDLRP98155 873 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 TGM3Q08188 693 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 DHX34Q14147 1143 aaKnown RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 FGFBP1Q14512 234 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 BCL2A1Q16548 175 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 BICRALQ6AI39 1079 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 ZNF550Q7Z398 422 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 YRDCQ86U90 279 aaKnown RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 GRAMD2AQ8IUY3 354 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 TRIM42Q8IWZ5 723 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 BBOF1Q8ND07 529 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 SRFBP1Q8NEF9 429 aaKnown RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 OR1J4Q8NGS1 313 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 PDLIM5Q96HC4 596 aaKnown RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 KCNK17Q96T54 332 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 GRIP2Q9C0E4 1043 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 OR2B2Q9GZK3 357 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 ESRP2Q9H6T0 727 aaKnown RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 TEX10Q9NXF1 929 aaPredicted RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 FBXO5Q9UKT4 447 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 LAMP3Q9UQV4 416 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 SLC22A14Q9Y267 594 aa13.65□□□□□ -0.22
PTPA-213ENST00000419582 MRPS18CQ9Y3D5 142 aaKnown RBP13.65□□□□□ -0.22
PTPA-213ENST00000419582 GRID2IPA4D2P6 1211 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
PTPA-213ENST00000419582 KCNAB3O43448 404 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 CBR3O75828 277 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 SCELO95171 688 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 PLAUP00749 431 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 PGRP06401 933 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 ZNF708P17019 499 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 KCNC1P48547 511 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 FBXW4P57775 412 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 IL2P60568 153 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 SNTA1Q13424 505 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 TOMM20Q15388 145 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 VWA1Q6PCB0 445 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 DRICH1Q6PGQ1 229 aaPredicted RBP13.64□□□□□ -0.23
PTPA-213ENST00000419582 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 ST13P4Q8IZP2 240 aaPredicted RBP13.64□□□□□ -0.23
PTPA-213ENST00000419582 GTPBP3Q969Y2 492 aaKnown RBP13.64□□□□□ -0.23
PTPA-213ENST00000419582 LINGO1Q96FE5 620 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 KCNC2Q96PR1 638 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 MAPKAP1Q9BPZ7 522 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 TBCDQ9BTW9 1192 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 COPS7BQ9H9Q2 264 aaPredicted RBP13.64□□□□□ -0.23
PTPA-213ENST00000419582 SPACA6W5XKT8 324 aa13.64□□□□□ -0.23
PTPA-213ENST00000419582 ANKDD1BA6NHY2 528 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 CDC7O00311 574 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 FGF17O60258 216 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 NAGAP17050 411 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 MAGEA6P43360 314 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 CLDN18P56856 261 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 PLIN5Q00G26 463 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 LOXL1Q08397 574 aaPredicted RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 TBX2Q13207 712 aaPredicted RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 TMEM249Q2WGJ8 235 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 UBAP2Q5T6F2 1119 aaKnown RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 LIPNQ5VXI9 398 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 SLC30A6Q6NXT4 461 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 RNF111Q6ZNA4 994 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 DGAT2L6Q6ZPD8 337 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 PEX26Q7Z412 305 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 VN1R5Q7Z5H4 357 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 GAS2L3Q86XJ1 694 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 KRT78Q8N1N4 520 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 C17orf47Q8NEP4 570 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 TANKQ92844 425 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 ZC3HAV1LQ96H79 300 aaKnown RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 TNFRSF13CQ96RJ3 184 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 KRT12Q99456 494 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 PELOQ9BRX2 385 aaKnown RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 CAPS2Q9BXY5 557 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 SHARPINQ9H0F6 387 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 OPN3Q9H1Y3 402 aaPredicted RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 OR10A4Q9H209 315 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 EHD1Q9H4M9 534 aa13.63□□□□□ -0.23
PTPA-213ENST00000419582 BARX1Q9HBU1 254 aaPredicted RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 EXO1Q9UQ84 846 aaKnown RBP13.63□□□□□ -0.23
PTPA-213ENST00000419582 GPRIN2O60269 458 aa13.62□□□□□ -0.23
PTPA-213ENST00000419582 OR10H2O60403 315 aa13.62□□□□□ -0.23
PTPA-213ENST00000419582 MLNP12872 115 aa13.62□□□□□ -0.23
PTPA-213ENST00000419582 ATP5A1P25705 553 aaKnown RBP13.62□□□□□ -0.23
PTPA-213ENST00000419582 HNMTP50135 292 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms