RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TRIB1Q96RU8 372 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 MTERF1Q99551 399 aaKnown RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 GPR22Q99680 433 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 CPNE1Q99829 537 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 YIPF4Q9BSR8 244 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 PRDM14Q9GZV8 571 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 ALG9Q9H6U8 611 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 WDR41Q9HAD4 459 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 NEUROD4Q9HD90 331 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 SNX15Q9NRS6 342 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 NUDT4Q9NZJ9 180 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 CD8B2A6NJW9 211 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 GLOD5A6NK44 160 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 WASHC1A8K0Z3 465 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 CXorf49A8MYA2 514 aaPredicted RBP15.3■□□□□ 0.04
MRPL55-220ENST00000411464 SUPT3HB4E1H0 165 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 EEF1E1-BLOC1S5C9J1V9 151 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 K7EPI3 171 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 PLPP1O14494 284 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 TP73O15350 636 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 ZSCAN12O43309 604 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 EEF1E1O43324 174 aaKnown RBP15.3■□□□□ 0.04
MRPL55-220ENST00000411464 SUPT3HO75486 399 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 GALNSP34059 522 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 TMED10P49755 219 aaKnown RBP15.3■□□□□ 0.04
MRPL55-220ENST00000411464 AGFG1P52594 562 aaKnown RBP15.3■□□□□ 0.04
MRPL55-220ENST00000411464 ARFIP1P53367 373 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 NRG3P56975 720 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 FBXW4P57775 412 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 RPP38P78345 283 aaKnown RBP15.3■□□□□ 0.04
MRPL55-220ENST00000411464 PHEXP78562 749 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 LTBQ06643 244 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 GRHL2Q6ISB3 625 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 CYP20A1Q6UW02 462 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 RNF175Q8N4F7 328 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 C18orf12Q96KH6 178 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 SECISBP2Q96T21 854 aaKnown RBP15.3■□□□□ 0.04
MRPL55-220ENST00000411464 RBBP8Q99708 897 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 ANGPTL4Q9BY76 406 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 PLEKHF2Q9H8W4 249 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 CALHM2Q9HA72 323 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 LYARQ9NX58 379 aaKnown RBP15.3■□□□□ 0.04
MRPL55-220ENST00000411464 SLC6A5Q9Y345 797 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 ANGPTL3Q9Y5C1 460 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 PCDHGA11Q9Y5H2 935 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 NPFFR2Q9Y5X5 522 aa15.3■□□□□ 0.04
MRPL55-220ENST00000411464 A0A1W2PR48 441 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 CLCA1A8K7I4 914 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 GOSR1O95249 250 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 FAM58BPP0C7Q3 252 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 SLC35E2BP0CK96 405 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 SLC35E2P0CK97 266 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 NR2F6P10588 404 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 BMP7P18075 431 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 ADSLP30566 484 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-220ENST00000411464 SSTR1P30872 391 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 GP5P40197 560 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 SORDQ00796 357 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 SETDB1Q15047 1291 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 ZKSCAN8Q15776 578 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-220ENST00000411464 BICRALQ6AI39 1079 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 RAPH1Q70E73 1250 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 ISCA2Q86U28 154 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 TEX9Q8N6V9 391 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 SPPL2AQ8TCT8 520 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 ABTB1Q969K4 478 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-220ENST00000411464 UBQLN3Q9H347 655 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 NMRAL1Q9HBL8 299 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 TEX10Q9NXF1 929 aaPredicted RBP15.29■□□□□ 0.04
MRPL55-220ENST00000411464 C15orf41Q9Y2V0 281 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 SNX24Q9Y343 169 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 ASB4Q9Y574 426 aa15.29■□□□□ 0.04
MRPL55-220ENST00000411464 MBD3L4A6NDZ8 208 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 MBD3L3A6NE82 208 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 MBD3L5A6NJ08 208 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 UBXN8O00124 270 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 EEDO75530 441 aaKnown RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 IL18BPO95998 194 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 CLPSP04118 112 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 HOXC12P31275 282 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 SSTR4P31391 388 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 SPRP35270 261 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 CASP3P42574 277 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 RPS13P62277 151 aaKnown RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 CBLBQ13191 982 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 RCAN2Q14206 197 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 NHSL2Q5HYW2 709 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 LIPJQ5W064 366 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 CYS1Q717R9 158 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 Q71RC1 249 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 TBC1D1Q86TI0 1168 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 ZNF441Q8N8Z8 693 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 MBD3L2Q8NHZ7 208 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-220ENST00000411464 UBTD2Q8WUN7 234 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 REPS1Q96D71 796 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 WDYHV1Q96HA8 205 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 SMR3AQ99954 134 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 UGT2B28Q9BY64 529 aa15.28■□□□□ 0.04
MRPL55-220ENST00000411464 DDX31Q9H8H2 851 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms