RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 NKX3-1Q99801 234 aaPredicted RBP3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 LRRCC1Q9C099 1032 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 EBF3Q9H4W6 596 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 KAT8Q9H7Z6 458 aaKnown RBP3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 EBF2Q9HAK2 575 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 TECRQ9NZ01 308 aaKnown RBP3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 KLRF1Q9NZS2 232 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 PIPOXQ9P0Z9 390 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 CHRNA9Q9UGM1 479 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 ATG4BQ9Y4P1 393 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 COX11Q9Y6N1 276 aa3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 WDR33Q9C0J8 1336 aaKnown RBP3.39□□□□□ -1.87
RNU4-78P-201ENST00000410940 PIK3R4Q99570 1358 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ZNF587BE7ETH6 402 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 NPIPA7E9PJI5 369 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 BOLA2-SMG1P6H3BVE0 249 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SLC1A7O00341 560 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SDHDO14521 159 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ALOX15BO15296 676 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ZNF264O43296 627 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 KRT86O43790 486 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SAP30O75446 220 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 PAK4O96013 591 aaPredicted RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 GOT2P00505 430 aaKnown RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SERPINA3P01011 423 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 EDN1P05305 212 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 FGF4P08620 206 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 HSMCR30P0CW71 290 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 NPIPA8P0DM63 369 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 CDH1P12830 882 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 HLA-DOBP13765 273 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ANXA8P13928 327 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 PRF1P14222 555 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 LIFP15018 202 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 HNF1AP20823 631 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 NT5EP21589 574 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 GPX3P22352 226 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 EPHA2P29317 976 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ALDH1B1P30837 517 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 CCR1P32246 355 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ANP32AP39687 249 aaKnown RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 FHITP49789 147 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 PRMT2P55345 433 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 OR1D5P58170 312 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 DCDC1P59894 354 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 KRTAP10-9P60411 292 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 HAND2P61296 217 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 MRPS6P82932 125 aaKnown RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 MAP2K1Q02750 393 aaPredicted RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SRYQ05066 204 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 DPTQ07507 201 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SRSF5Q13243 272 aaKnown RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 RBM39Q14498 530 aaKnown RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 KRT81Q14533 505 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 NFATC4Q14934 902 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 EFTUD2Q15029 972 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 CDKN3Q16667 212 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 LRRC37A5PQ49AS3 106 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 Q4G0T1 1027 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SPANXN2Q5MJ10 180 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 STXBP5Q5T5C0 1151 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 PRAMEF5Q5TYX0 476 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ANXA8L1Q5VT79 327 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 PRAMEF6Q5VXH4 476 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 LEG1Q6P5S2 330 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 RAD9BQ6WBX8 426 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 COLCA1Q6ZS62 124 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 BZW1Q7L1Q6 419 aaKnown RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ERASQ7Z444 233 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SERINC5Q86VE9 423 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ODF3L1Q8IXM7 274 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 EFCAB13Q8IY85 973 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 PARP8Q8N3A8 854 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 KLHDC1Q8N7A1 406 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SLC37A3Q8NCC5 494 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 NFAM1Q8NET5 270 aaPredicted RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SPATA4Q8NEY3 305 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 OR5T2Q8NGG2 359 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 RAB3IL1Q8TBN0 382 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 AZIN2Q96A70 460 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 RTP4Q96DX8 246 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 C10orf90Q96M02 699 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 RPRD1AQ96P16 312 aaPredicted RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ERGIC2Q96RQ1 377 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 TESK2Q96S53 571 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 NPY6RQ99463 290 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 CHP1Q99653 195 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 C19orf43Q9BQ61 176 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 CCDC3Q9BQI4 270 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 IQCGQ9H095 443 aaKnown RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 EGLN3Q9H6Z9 239 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 DCTPP1Q9H773 170 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 METTL7AQ9H8H3 244 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 UBE2TQ9NPD8 197 aaPredicted RBP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 SEC14L3Q9UDX4 400 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 CIDEBQ9UHD4 219 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 ZNHIT2Q9UHR6 403 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 CDH9Q9ULB4 789 aa3.38□□□□□ -1.87
RNU4-78P-201ENST00000410940 NAP1L2Q9ULW6 460 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms