RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FBRSL1Q9HCM7 1045 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 EQTNQ9NQ60 294 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 C5orf42Q9H799 3197 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 A0A1B0GTW7 788 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ANTXRLA6NF34 631 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 E7EQ34 232 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PEX12O00623 359 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 OR2B3O76000 313 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CPNE6O95741 557 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PROS1P07225 676 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MAGP20916 626 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 RFX3P48380 749 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 AP3S2P59780 193 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CEACAM7Q14002 265 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PDZK1Q5T2W1 519 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MISPQ8IVT2 679 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 LGI4Q8N135 537 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 C19orf18Q8NEA5 215 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM125Q96AQ2 219 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TMCO6Q96DC7 493 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TRNT1Q96Q11 434 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ALPK1Q96QP1 1244 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PKP4Q99569 1192 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF395Q9H8N7 513 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CSNK1G3Q9Y6M4 447 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 LILRA5A6NI73 299 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 GJE1A6NN92 205 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PRRT4C9JH25 899 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TBX19O60806 448 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM127O75204 238 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MSX2P35548 267 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CPOXP36551 454 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PCYT1AP49585 367 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 DSG2Q14126 1118 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF773Q6PK81 442 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 OR4K1Q8NGD4 311 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CHTF18Q8WVB6 975 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 FAM117AQ9C073 453 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 NKX2-4Q9H2Z4 354 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TRIM36Q9NQ86 728 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TIGARQ9NQ88 270 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 FARSBQ9NSD9 589 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PEX16Q9Y5Y5 336 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 KCNE1BA0A087WTH5 132 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SLC22A31A6NKX4 558 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF879B4DU55 563 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 B4GALT3O60512 393 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SH3BGRLO75368 114 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CAPN3P20807 821 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 RPL4P36578 427 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 GALK1P51570 392 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SEC13P55735 322 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 NTHL1P78549 312 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 RUNDC3AQ59EK9 446 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CDH24Q86UP0 819 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 RNF130Q86XS8 419 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CLVS1Q8IUQ0 354 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ERI1Q8IV48 349 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 COQ8BQ96D53 544 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PIP5K1AQ99755 562 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SEMA6CQ9H3T2 930 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 KIAA1671Q9BY89 1806 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PRUNE2Q8WUY3 3088 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ARRDC5A6NEK1 342 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 HLA-DPB1P04440 258 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 BCHEP06276 602 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF8P17098 575 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SLC15A1P46059 708 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TPMTP51580 245 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TEKQ02763 1124 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SLC44A4Q53GD3 710 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 FAM182AQ5T1J6 154 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CMIPQ8IY22 773 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 METTL4Q8N3J2 472 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 DTWD1Q8N5C7 304 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MS4A15Q8N5U1 240 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 GRIP2Q9C0E4 1043 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 STUB1Q9UNE7 303 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MMACHCQ9Y4U1 282 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 NUDT21O43809 227 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MATN1P21941 496 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PFN3P60673 137 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MLC1Q15049 377 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PON3Q15166 354 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 NEDD8Q15843 81 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PYCR3Q53H96 274 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 BORCS5Q969J3 196 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 HSH2DQ96JZ2 352 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 MYOCQ99972 504 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 TESQ9UGI8 421 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 OR1A2Q9Y585 309 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 A0A0J9YVX5 310 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 H3BQ06 376 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 ANKRD28O15084 1053 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 THBS1P07996 1170 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 C1SP09871 688 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 CTSOP43234 321 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 HSD11B2P80365 405 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms