RNA–Protein interactions for RNA: ENST00000394303.7

CACNB1-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNB1, Length 3,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-202ENST00000394303 LRRC26Q2I0M4 334 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 FAM214AQ32MH5 1076 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 CEP78Q5JTW2 689 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 WDR45BQ5MNZ6 344 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 FAAH2Q6GMR7 532 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 CHMP1BQ7LBR1 199 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 ZNF438Q7Z4V0 828 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 FGD2Q7Z6J4 655 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 IZUMO1Q8IYV9 350 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 FBXO15Q8NCQ5 510 aaPredicted RBP12.6□□□□□ -0.39
CACNB1-202ENST00000394303 GRPEL2Q8TAA5 225 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 RBM18Q96H35 190 aaKnown RBP12.6□□□□□ -0.39
CACNB1-202ENST00000394303 ZNF514Q96K75 400 aaPredicted RBP12.6□□□□□ -0.39
CACNB1-202ENST00000394303 TMED9Q9BVK6 235 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 TMEM45AQ9NWC5 275 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 TLR4O00206 839 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 PCDHGA12O60330 932 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 ICMTO60725 284 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 CR2P20023 1033 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 LBX1P52954 281 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 SLAMF1Q13291 335 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 BIKQ13323 160 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 LIPJQ5W064 366 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 B3GLCTQ6Y288 498 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 ZNF783Q6ZMS7 281 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 DCUN1D3Q8IWE4 304 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 COX18Q8N8Q8 333 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 SIMC1Q8NDZ2 872 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 NEDD4LQ96PU5 975 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 MBD1Q9UIS9 605 aaPredicted RBP12.6□□□□□ -0.39
CACNB1-202ENST00000394303 PRELID1Q9Y255 219 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 M0R082 166 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 CSNK2A2P19784 350 aaPredicted RBP12.6□□□□□ -0.39
CACNB1-202ENST00000394303 CRISP3P54108 245 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 PRR5P85299 388 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 IL18Q14116 193 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 SMU1Q2TAY7 513 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 HLA-DQA1Q5Y7H0 255 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 REEP3Q6NUK4 255 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 LAPTM4BQ86VI4 370 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 FRMD1Q8N878 549 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 OR51A7Q8NH64 312 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 ZNF675Q8TD23 568 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
CACNB1-202ENST00000394303 FGF13Q92913 245 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 TMCO6Q96DC7 493 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 RIPOR3Q96MK2 946 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 DOHHQ9BU89 302 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 MAPRE3Q9UPY8 281 aa12.6□□□□□ -0.39
CACNB1-202ENST00000394303 CTDSP2O14595 271 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 PRMT3O60678 531 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 MRPL3P09001 348 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 NAT1P18440 290 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 CSTF2P33240 577 aaKnown RBP eCLIP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 CA5AP35218 305 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 KDM4DQ6B0I6 523 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 SIGIRRQ6IA17 410 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 SPRED2Q7Z698 418 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 OXR1Q8N573 874 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 OR6K6Q8NGW6 343 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 MED30Q96HR3 178 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 ZFP3Q96NJ6 502 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 TRNT1Q96Q11 434 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 SLC30A2Q9BRI3 323 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 SLC6A13Q9NSD5 602 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 SPATA2Q9UM82 520 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 STON1Q9Y6Q2 735 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 GTPBP1O00178 669 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 ENDOUP21128 410 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 ZNF852Q6ZMS4 543 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 HTR3DQ70Z44 454 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 ADGRD2Q7Z7M1 963 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 MRPL43Q8N983 215 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 SLC6A16Q9GZN6 736 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 SPRTNQ9H040 489 aaPredicted RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 NDRG4Q9ULP0 352 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 NEUROG3Q9Y4Z2 214 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 CHURC1-FNTBB4DL54 471 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 ANKRD28O15084 1053 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 MRPS14O60783 128 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 YES1P07947 543 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 GRK5P34947 590 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 GALK2Q01415 458 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 GINS1Q14691 196 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 RGNQ15493 299 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 ZNHIT3Q15649 155 aaPredicted RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.59□□□□□ -0.39
CACNB1-202ENST00000394303 COX20Q5RI15 118 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 CDC73Q6P1J9 531 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 FIGNL1Q6PIW4 674 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 TMPRSS11AQ6ZMR5 421 aa12.59□□□□□ -0.39
CACNB1-202ENST00000394303 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms