RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TREX2Q9BQ50 279 aaPredicted RBP21.81■■□□□ 1.08
VPS16-201ENST00000380443 CD93Q9NPY3 652 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 TRPC4Q9UBN4 977 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 A0A0G2JPF8 293 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 HNRNPCL2B2RXH8 293 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 HNRNPCL3B7ZW38 293 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 RGS10O43665 173 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 XPNPEP2O43895 674 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 FAM20BO75063 409 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 VIPP01282 170 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 HNRNPCL4P0DMR1 293 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 NR2F6P10588 404 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 FMO3P31513 532 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 RAB8AP61006 207 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 BTN3A2P78410 334 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 RPS26P11Q5JNZ5 115 aaPredicted RBP21.8■■□□□ 1.08
VPS16-201ENST00000380443 MANEAQ5SRI9 462 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 FBXO42Q6P3S6 717 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 P3H2Q8IVL5 708 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 ENTHD1Q8IYW4 607 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 LINC00471Q8N535 108 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 OR52J3Q8NH60 311 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 SUN3Q8TAQ9 357 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 HMGB4Q8WW32 186 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 XAGE5Q8WWM1 108 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 RSC1A1Q92681 617 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 RORBQ92753 470 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 CCDC90BQ9GZT6 254 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 MS4A12Q9NXJ0 267 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 ACTR10Q9NZ32 417 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 CALML5Q9NZT1 146 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 ACAD8Q9UKU7 415 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 AXIN1O15169 862 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 MPZL2O60487 215 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 UGT2B7P16662 529 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 EPHA2P29317 976 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 EMX1Q04741 257 aaPredicted RBP21.8■■□□□ 1.08
VPS16-201ENST00000380443 SLC44A2Q8IWA5 706 aaPredicted RBP21.8■■□□□ 1.08
VPS16-201ENST00000380443 ZNF540Q8NDQ6 660 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 RHOXF1Q8NHV9 184 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 UTP15Q8TED0 518 aaKnown RBP21.8■■□□□ 1.08
VPS16-201ENST00000380443 JPH3Q8WXH2 748 aaPredicted RBP21.8■■□□□ 1.08
VPS16-201ENST00000380443 NR4A3Q92570 626 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 COL21A1Q96P44 957 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 OR2A5Q96R48 311 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 MACROD1Q9BQ69 325 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 MGAT4BQ9UQ53 548 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 LIPT1Q9Y234 373 aa21.8■■□□□ 1.08
VPS16-201ENST00000380443 C2orf74A8MZ97 194 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 J3KTA2 159 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 PCDHGA12O60330 932 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 ATE1O95260 518 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 ADAP00813 363 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 CALRP27797 417 aaKnown RBP21.79■■□□□ 1.08
VPS16-201ENST00000380443 FIGLAQ6QHK4 219 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 CCDC71Q8IV32 467 aaPredicted RBP21.79■■□□□ 1.08
VPS16-201ENST00000380443 RBM12BQ8IXT5 1001 aaKnown RBP21.79■■□□□ 1.08
VPS16-201ENST00000380443 CCDC116Q8IYX3 515 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 SGCDQ92629 289 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 ZNF681Q96N22 645 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 NECAB3Q96P71 396 aaPredicted RBP21.79■■□□□ 1.08
VPS16-201ENST00000380443 LIN28AQ9H9Z2 209 aaKnown RBP21.79■■□□□ 1.08
VPS16-201ENST00000380443 PNMA8BQ9ULN7 279 aaPredicted RBP21.79■■□□□ 1.08
VPS16-201ENST00000380443 RNF6Q9Y252 685 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 KLHL20Q9Y2M5 609 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 PCDHGA10Q9Y5H3 936 aa21.79■■□□□ 1.08
VPS16-201ENST00000380443 FAAHO00519 579 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 PCDH17O14917 1159 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 CASC3O15234 703 aaKnown RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 WBP4O75554 376 aaKnown RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 CD72P21854 359 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 C18orf63Q68DL7 685 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 SZRD1Q7Z422 152 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 ANKRD13BQ86YJ7 626 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 ZNF655Q8N720 491 aaPredicted RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 FAR1Q8WVX9 515 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 FCGR1BQ92637 280 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 NTMQ9P121 344 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 ERVK-18Q9QC07 812 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 SLC9A8Q9Y2E8 581 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 GLOD5A6NK44 160 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 SHISA7A6NL88 538 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 AGR2O95994 175 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 STATHP02808 62 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 IGHV4-34P06331 123 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 ZNF888P0CJ79 500 aaPredicted RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 TLX1P31314 330 aaPredicted RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 GPR18Q14330 331 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 SYPL1Q16563 259 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 SYT6Q5T7P8 510 aaPredicted RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 ZNF770Q6IQ21 691 aaPredicted RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 TCTN3Q6NUS6 607 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 ABHD13Q7L211 337 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 OR13H1Q8NG92 308 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 ELP4Q96EB1 424 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 NMNAT1Q9HAN9 279 aaPredicted RBP21.78■■□□□ 1.08
VPS16-201ENST00000380443 SLC2A4RGQ9NR83 387 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 RLIMQ9NVW2 624 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 PILRAQ9UKJ1 303 aa21.78■■□□□ 1.08
VPS16-201ENST00000380443 ZSCAN9O15535 394 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms