RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 OR1E2P47887 323 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 CRISP3P54108 245 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 PRR5P85299 388 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 ILF3Q12906 894 aaKnown RBP eCLIP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 RSPO4Q2I0M5 234 aaPredicted RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 PRRT3Q5FWE3 981 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 COLEC12Q5KU26 742 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 NRROSQ86YC3 692 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 P3H2Q8IVL5 708 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 TAGAPQ8N103 731 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC44A3Q8N4M1 653 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC5A8Q8N695 610 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 AMER3Q8N944 861 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SMYD1Q8NB12 490 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 FAM174AQ8TBP5 190 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 PHF10Q8WUB8 498 aaKnown RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 MAPKAP1Q9BPZ7 522 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 GSDMCQ9BYG8 508 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 LHPPQ9H008 270 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 OR51I1Q9H343 314 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 C3orf14Q9HBI5 128 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 ACER3Q9NUN7 267 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 POT1Q9NUX5 634 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 USP36Q9P275 1121 aaKnown RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 C5AR2Q9P296 337 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 APOBEC3BQ9UH17 382 aaKnown RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 PHF11Q9UIL8 331 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 CES1P1Q9UKY3 287 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 TMCC3Q9ULS5 477 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SH3GLB1Q9Y371 365 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 KLK4Q9Y5K2 254 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 GPC6Q9Y625 555 aaPredicted RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 CACNA1IQ9P0X4 2223 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A0G2JN53 185 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A1W2PR48 441 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 C4orf51C9J302 202 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 BTN3A3O00478 584 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 EMC8O43402 210 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 PROM1O43490 865 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RGS10O43665 173 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ASNA1O43681 348 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 MPZL2O60487 215 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 B4GALT2O60909 372 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 NDUFS2O75306 463 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ADAP00813 363 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TNFRSF1BP20333 461 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CBLP22681 906 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CERS1P27544 350 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 MPIP34949 423 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 BUD31P41223 144 aaPredicted RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CCINQ13939 588 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 SUZ12Q15022 739 aaKnown RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 NPTX1Q15818 432 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 DUSP7Q16829 419 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ALG11Q2TAA5 492 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 PRSS48Q7RTY5 328 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RD3Q7Z3Z2 195 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ABI3BPQ7Z7G0 1075 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TRIM48Q8IWZ4 208 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 LINC00471Q8N535 108 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF540Q8NDQ6 660 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 SUN3Q8TAQ9 357 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 NR4A3Q92570 626 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RSC1A1Q92681 617 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RORBQ92753 470 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TSACCQ96A04 125 aaPredicted RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TM4SF19Q96DZ7 209 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 DHRS1Q96LJ7 313 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ALPK1Q96QP1 1244 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TMEM168Q9H0V1 697 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 KCNK12Q9HB15 430 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 PAK1IP1Q9NWT1 392 aaPredicted RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CALML5Q9NZT1 146 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 SEC14L3Q9UDX4 400 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FBXL21Q9UKT6 434 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ATG4BQ9Y4P1 393 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 PCDHGA6Q9Y5G7 932 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF780BQ9Y6R6 833 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 MDC1Q14676 2089 aaKnown RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 KIR2DS5A0A0G2JLQ3 304 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A0G2JNG1 304 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A0G2JPF8 293 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 HNRNPCL2B2RXH8 293 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 HNRNPCL3B7ZW38 293 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 PTGES3LE9PB15 166 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 H0Y8X5 98 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 KIR2DS3K7RE56 304 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FAAHO00519 579 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CASC3O15234 703 aaKnown RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 PPM1DO15297 605 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 XPNPEP2O43895 674 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ERAL1O75616 437 aaKnown RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ATE1O95260 518 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 EML2O95834 649 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RECKO95980 971 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 VIPP01282 170 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 HNRNPCL4P0DMR1 293 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 OR12D1P0DN82 309 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 NR2F6P10588 404 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms