RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 C8AP07357 584 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 OSMP13725 252 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 PSMA1P25786 263 aaKnown RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 CSTF2P33240 577 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMC3-201ENST00000361804 DGKGP49619 791 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ERVFC1P60507 584 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 PDE7AQ13946 482 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 TEAD2Q15562 447 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ZNF630Q2M218 657 aaPredicted RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 TCEAL5Q5H9L2 206 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 CASP12Q6UXS9 341 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 C6orf120Q7Z4R8 191 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 LHFPL3Q86UP9 236 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 RAB43Q86YS6 212 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ATP6V1C2Q8NEY4 427 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 DOK4Q8TEW6 326 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 RSPRY1Q96DX4 576 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 C1GALT1C1Q96EU7 318 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 MRGPRX3Q96LB0 322 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 FOPNLQ96NB1 174 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 MAPKAP1Q9BPZ7 522 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 NLNQ9BYT8 704 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 CPEB1Q9BZB8 566 aaKnown RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 HCN2Q9UL51 889 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 TMCC3Q9ULS5 477 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 KNL1Q8NG31 2342 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 WASH3PC4AMC7 463 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 HMGN4O00479 90 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ZNF197O14709 1029 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 HYAL3O43820 417 aaPredicted RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 SLC28A2O43868 658 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 MMP11P24347 488 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 GPC1P35052 558 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 HMGA2P52926 109 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 RBBP4Q09028 425 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 PYDC2Q56P42 97 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ZNF544Q6NX49 715 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ERAP2Q6P179 960 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 TTC23LQ6PF05 361 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ZER1Q7Z7L7 766 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 DDX53Q86TM3 631 aaKnown RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ZFPM2Q8WW38 1151 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 PIK3R3Q92569 461 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ARMC5Q96C12 935 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 ZG16BQ96DA0 208 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 NELL2Q99435 816 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 PLEKHB1Q9UF11 243 aaPredicted RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 ASF1AQ9Y294 204 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 A3GALT2U3KPV4 340 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 DSPPQ9NZW4 1301 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.01□□□□□ -0.81
SMC3-201ENST00000361804 H7BY64 318 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 MYL12BO14950 172 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 HOXA2O43364 376 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 TMPRSS11DO60235 418 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 LATS1O95835 1130 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 LRG1P02750 347 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 EPHX1P07099 455 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 C8orf89P0DMQ9 161 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 S100A1P23297 94 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 KIR2DL3P43628 341 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 RORCP51449 518 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 GINS1Q14691 196 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 RAET1GQ6H3X3 334 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 NXPE4Q6UWF7 544 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 PDZD3Q86UT5 571 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 TRAM1L1Q8N609 369 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 OR52P1PQ8NH57 321 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 SLC9A6Q92581 669 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 ZNF558Q96NG5 402 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 PRAP1Q96NZ9 151 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 SPATA9Q9BWV2 254 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 CNIH4Q9P003 139 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 SEC14L3Q9UDX4 400 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 NDRG2Q9UN36 371 aaKnown RBP10.01□□□□□ -0.81
SMC3-201ENST00000361804 SHISA3A0PJX4 238 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 HRO43593 1189 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 MMP20O60882 483 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 GNRH1P01148 92 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 H1F0P07305 194 aaKnown RBP10.01□□□□□ -0.81
SMC3-201ENST00000361804 HSD3B1P14060 373 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 SYN1P17600 705 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 HSD3B2P26439 372 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 ETV6P41212 452 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 POLR2LP62875 67 aaKnown RBP10.01□□□□□ -0.81
SMC3-201ENST00000361804 TYW3Q6IPR3 259 aaKnown RBP10.01□□□□□ -0.81
SMC3-201ENST00000361804 KIAA0907Q7Z7F0 614 aaPredicted RBP10.01□□□□□ -0.81
SMC3-201ENST00000361804 CPXM2Q8N436 756 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 TOX2Q96NM4 488 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 GFM1Q96RP9 751 aaKnown RBP10.01□□□□□ -0.81
SMC3-201ENST00000361804 CMAHPQ9Y471 501 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 KCNE3Q9Y6H6 103 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 HEATR5BQ9P2D3 2071 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 FABP12A6NFH5 140 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 CENPXA8MT69 81 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 ZNF670-ZNF695F2Z2N8 137 aa10.01□□□□□ -0.81
SMC3-201ENST00000361804 PLA2G10O15496 165 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms