RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 NDUFV2P19404 249 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 LCN1P31025 176 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 ADRA1AP35348 466 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 EIF1AXP47813 144 aaKnown RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 RPA4Q13156 261 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 SELPLGQ14242 412 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 UGT3A2Q3SY77 523 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 KIAA0319Q5VV43 1072 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 TMEM102Q8N9M5 508 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 CPNE5Q9HCH3 593 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 NOP16Q9Y3C1 178 aaKnown RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 C1orf226A1L170 272 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 IGLON5A6NGN9 336 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 TRIM64CA6NLI5 447 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 GPR37L1O60883 481 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 CCL5P13501 91 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 OSMP13725 252 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 ZNF26P17031 533 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 C21orf33P30042 268 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 CA5AP35218 305 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 ATXN7L3Q14CW9 347 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 AKAP1Q92667 903 aaKnown RBP eCLIP13.09□□□□□ -0.316e-7■■□□□ 13.9
VCP-201ENST00000358901 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 C4AP0C0L4 1744 aa13.08□□□□□ -0.31
VCP-201ENST00000358901 C4BP0C0L5 1744 aa13.08□□□□□ -0.31
VCP-201ENST00000358901 A0A1W2PQL4 384 aaPredicted RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 METTL21EPA6NDL7 271 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 SOCS7O14512 581 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 TNFP01375 233 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 CD40LGP29965 261 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 RBM34P42696 430 aaKnown RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 PSMA6P60900 246 aaKnown RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 SNTB2Q13425 540 aaKnown RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 SMN1Q16637 294 aaKnown RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 MICAQ29983 383 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 RPS26P11Q5JNZ5 115 aaPredicted RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 MLIPQ5VWP3 458 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 DCDC5Q6ZRR9 648 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 AMIGO1Q86WK6 493 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 CBARPQ8N350 705 aaPredicted RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 ZBTB20Q9HC78 741 aaPredicted RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 LAMP5Q9UJQ1 280 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 ZSCAN5BA6NJL1 495 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 M0R3H8 397 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 SLC19A2O60779 497 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 PTGS2P35354 604 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 NRG3P56975 720 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 GSTM4Q03013 218 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 CAMK1Q14012 370 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 HSD17B12Q53GQ0 312 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 RPLP0P6Q8NHW5 317 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 NTMT1Q9BV86 223 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 GRHPRQ9UBQ7 328 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 BTNL2Q9UIR0 455 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 M0R233 179 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 PCDH17O14917 1159 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 ARHGEF15O94989 841 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 PTTG1O95997 202 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 CCR7P32248 378 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 GNG2P59768 71 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 IRF5Q13568 498 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 KEAP1Q14145 624 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 CPZQ66K79 652 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 ASPGQ86U10 573 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 FOXRED2Q8IWF2 684 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 RBM12BQ8IXT5 1001 aaKnown RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 SPERTQ8NA61 448 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 CIDECQ96AQ7 238 aaPredicted RBP13.08□□□□□ -0.32
VCP-201ENST00000358901 ITPKCQ96DU7 683 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 DNAJA3Q96EY1 480 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 BCL7BQ9BQE9 202 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 NANSQ9NR45 359 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 PCDHGA2Q9Y5H1 932 aa13.08□□□□□ -0.32
VCP-201ENST00000358901 CACNA1CQ13936 2221 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 ACOT8O14734 319 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 LATO43561 262 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 CSTAP01040 98 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 RLN2P04090 185 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 DRD2P14416 443 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 GJA5P36382 358 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 SLC6A9P48067 706 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 SIM1P81133 766 aaPredicted RBP13.07□□□□□ -0.32
VCP-201ENST00000358901 CHAF1BQ13112 559 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 RAB33AQ14088 237 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 DHCR24Q15392 516 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 PNCKQ6P2M8 343 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 ZNF227Q86WZ6 799 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 RNF175Q8N4F7 328 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 PLA2G15Q8NCC3 412 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 OR5M3Q8NGP4 307 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 NEIL2Q969S2 332 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 RAB7BQ96AH8 199 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 CREB3L1Q96BA8 519 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 EIF1AYO14602 144 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms