RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLC5A7Q9GZV3 580 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 OR51E2Q9H255 320 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 NELFAQ9H3P2 528 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 NTN4Q9HB63 628 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 OARD1Q9Y530 152 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 AOC2O75106 756 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ADAP00813 363 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 CSTBP04080 98 aaKnown RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ALG1LQ6GMV1 187 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 CFAP77Q6ZQR2 320 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 GALNT13Q8IUC8 556 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ADGRG5Q8IZF4 528 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TEX26Q8N6G2 289 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 LURAP1Q96LR2 239 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TWNKQ96RR1 684 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 GPR20Q99678 358 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF226Q9NYT6 803 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 POU2F3Q9UKI9 436 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ITGB4P16144 1822 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 MED1Q15648 1581 aaPredicted RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 MCM3APO60318 1980 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 WASH3PC4AMC7 463 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF254O75437 659 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 INCA1Q0VD86 236 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 SLC10A6Q3KNW5 377 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 BCL7AQ4VC05 210 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 PMEPA1Q969W9 287 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 OTUB2Q96DC9 234 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 BORCS6Q96GS4 357 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TAPBPLQ9BX59 468 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 SMOC2Q9H3U7 446 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 REEP4Q9H6H4 257 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ZFP57Q9NU63 452 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 LRFN1Q9P244 771 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ACOT7O00154 380 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 NDUFS4O43181 175 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 LCMT2O60294 686 aaKnown RBP8.4□□□□□ -1.07
COL6A6-201ENST00000358511 MMP20O60882 483 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 IL1AP01583 271 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 EDNRBP24530 442 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 SCGB2A2Q13296 93 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 BATFQ16520 125 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 LIPJQ5W064 366 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 MALSU1Q96EH3 234 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 JSRP1Q96MG2 331 aaPredicted RBP8.4□□□□□ -1.07
COL6A6-201ENST00000358511 NSUN5Q96P11 429 aaKnown RBP8.4□□□□□ -1.07
COL6A6-201ENST00000358511 C19orf12Q9NSK7 152 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 DCAF13Q9NV06 445 aaKnown RBP8.4□□□□□ -1.07
COL6A6-201ENST00000358511 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 RTTNQ86VV8 2226 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 HYKKA2RU49 373 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 ZBTB7AO95365 584 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 ALDH3B1P43353 468 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 MLLT10P55197 1068 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM220Q6QAJ8 160 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 SUN3Q8TAQ9 357 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 NIPAL2Q9H841 368 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 EVLQ9UI08 416 aaPredicted RBP8.4□□□□□ -1.07
COL6A6-201ENST00000358511 KLHL21Q9UJP4 597 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 DNAJC15Q9Y5T4 150 aa8.4□□□□□ -1.07
COL6A6-201ENST00000358511 CRYBG1Q9Y4K1 1723 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 HPGDSO60760 199 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 AGXTP21549 392 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 CHATP28329 748 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SSTR2P30874 369 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PYCR1P32322 319 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 GCGRP47871 477 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 CHAF1BQ13112 559 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SLC35F1Q5T1Q4 408 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SYPL2Q5VXT5 272 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 FAM83FQ8NEG4 500 aaPredicted RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 BBS10Q8TAM1 723 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 TRIB3Q96RU7 358 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ACSL6Q9UKU0 697 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 CA5BQ9Y2D0 317 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 MMP3P08254 477 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 GIFP27352 417 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 GLP1RP43220 463 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 RIN1Q13671 783 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF425Q6IV72 752 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 B3GNT8Q7Z7M8 397 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SLC22A15Q8IZD6 547 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF611Q8N823 705 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 OR56B4Q8NH76 319 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PROKR1Q8TCW9 393 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SIAEQ9HAT2 523 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 POLHQ9Y253 713 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PRSS44E7EML9 344 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PRNPP04156 253 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 FCER2P06734 321 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 RAB3AP20336 220 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 GDF5P43026 501 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 BRCC3P46736 316 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 EEF1A2Q05639 463 aaKnown RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ABRAXAS2Q15018 415 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PCGF3Q3KNV8 242 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 KCTD20Q7Z5Y7 419 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 OR56A3Q8NH54 315 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 NLE1Q9NVX2 485 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms