RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 C19orf43Q9BQ61 176 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 FAM83CQ9BQN1 747 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 NKX2-4Q9H2Z4 354 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 EPHX3Q9H6B9 360 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 FABP12A6NFH5 140 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 PCDH17O14917 1159 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 LILRB3O75022 631 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 GADD45AP24522 165 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 C21orf33P30042 268 aaPredicted RBP12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 WSCD2Q2TBF2 565 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 PLET1Q6UQ28 207 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 IQCF1Q8N6M8 205 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 PLA2G15Q8NCC3 412 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 SUN5Q8TC36 379 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 MARK1Q9P0L2 795 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
PCDHB9-201ENST00000316105 CDRT1O95170 752 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 OR5F1O95221 314 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 ACADLP28330 430 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 BCL7AQ4VC05 210 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 SLC35F1Q5T1Q4 408 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 TMEM53Q6P2H8 277 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 FAM220AQ7Z4H9 259 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 GHDCQ8N2G8 530 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 HORMAD2Q8N7B1 307 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 LRR1Q96L50 414 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 GAL3ST4Q96RP7 486 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 APOOQ9BUR5 198 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 AMBRA1Q9C0C7 1298 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 ANKRA2Q9H9E1 313 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 POLE4Q9NR33 117 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 SPATA6Q9NWH7 488 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 TNFRSF10DQ9UBN6 386 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 PGRMC2O15173 223 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 B4GALT2O60909 372 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 SCN2BO60939 215 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 SLC25A12O75746 678 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 WISP3O95389 354 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 C1orf61Q13536 156 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 LIPKQ5VXJ0 399 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 ZNF544Q6NX49 715 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 LRRC25Q8N386 305 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 KLHL36Q8N4N3 616 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 OR13F1Q8NGS4 319 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 OR52P1PQ8NH57 321 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 INSM2Q96T92 566 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 ASPNQ9BXN1 380 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 SPRTNQ9H040 489 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 RALGAPA2Q2PPJ7 1873 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 MYO16Q9Y6X6 1858 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 TET1Q8NFU7 2136 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 FAM240BA0A1B0GVZ2 78 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 HOXC11O43248 304 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 OXSR1O95747 527 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 HMGN2P05204 90 aaKnown RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 ARAFP10398 606 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 VSX2P58304 361 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 PPP2R2BQ00005 443 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 PTGES3Q15185 160 aaKnown RBP12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 LILRA6Q6PI73 481 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 ADGRD2Q7Z7M1 963 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 RAB43Q86YS6 212 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 ACOT4Q8N9L9 421 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 OR52E4Q8NGH9 312 aa12.73□□□□□ -0.37
PCDHB9-201ENST00000316105 TCRBV21S2A2A0A5A6 115 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 TRIM64CA6NLI5 447 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 GAPDHSO14556 408 aaPredicted RBP12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 CLEC3AO75596 197 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 PRKAR1AP10644 381 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 OSMP13725 252 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 AK4P27144 223 aaPredicted RBP12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 RPS15AP62244 130 aaKnown RBP12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 PRDX1Q06830 199 aaKnown RBP12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 SPHARQ15513 63 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 MLIPQ5VWP3 458 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 SLC36A4Q6YBV0 504 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 CDH24Q86UP0 819 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 SNX33Q8WV41 574 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 NCSTNQ92542 709 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 SLC6A13Q9NSD5 602 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 DNMT3AQ9Y6K1 912 aaPredicted RBP12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 IFI30P13284 250 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 MC3RP41968 323 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 CXCR4P61073 352 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 KRT74Q7RTS7 529 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 FGD2Q7Z6J4 655 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 TECPR1Q7Z6L1 1165 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 TSTD1Q8NFU3 115 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 GNPDA2Q8TDQ7 276 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 CD180Q99467 661 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 RHPN2P1A8MT19 583 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 FRS3O43559 492 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 AKAP8O43823 692 aaKnown RBP12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 ETHE1O95571 254 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 RAB36O95755 333 aa12.72□□□□□ -0.37
PCDHB9-201ENST00000316105 IL1RNP18510 177 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms