RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PCDHB16Q9NRJ7 776 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 A0A0G2JPF8 293 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HNRNPCL3B7ZW38 293 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 CLEC3AO75596 197 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 YES1P07947 543 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HNRNPCL4P0DMR1 293 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 CAPN3P20807 821 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 ZNF140P52738 457 aaPredicted RBP15.2■□□□□ 0.02
USP42-201ENST00000306177 AP2S1P53680 142 aaPredicted RBP15.2■□□□□ 0.02
USP42-201ENST00000306177 GABARAPL2P60520 117 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HHEXQ03014 270 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 GPR26Q8NDV2 337 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 SGTBQ96EQ0 304 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 DHRS4Q9BTZ2 278 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 MTG2Q9H4K7 406 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 METTL8Q9H825 291 aaKnown RBP15.2■□□□□ 0.02
USP42-201ENST00000306177 KCNK12Q9HB15 430 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 RDH14Q9HBH5 336 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HHATLQ9HCP6 504 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 NENFQ9UMX5 172 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 PCDHGA7Q9Y5G6 932 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 CACNA1SQ13698 1873 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 ZNF217O75362 1048 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 MT-ND2P03891 347 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 NDUFV2P19404 249 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 PGCP20142 388 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HNRNPKP61978 463 aaKnown RBP eCLIP15.2■□□□□ 0.02
USP42-201ENST00000306177 PIGFQ07326 219 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 POU4F2Q12837 409 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 PKDCCQ504Y2 493 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 DHRS1Q96LJ7 313 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 ZNF696Q9H7X3 374 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 PLEKHA6Q9Y2H5 1048 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 ITGB7P26010 798 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 ARPC4P59998 168 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 NDUFAF5Q5TEU4 345 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 GLT8D1Q68CQ7 371 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 ALKAL1Q6UXT8 129 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 DPPA4Q7L190 304 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 FOXJ1Q92949 421 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 TRMT2BQ96GJ1 504 aaKnown RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 CLSTN3Q9BQT9 956 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 CPEB1Q9BZB8 566 aaKnown RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 GJD2Q9UKL4 321 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 NHSL1Q5SYE7 1610 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 LRRN3E7EW58 273 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 RPS17P08708 135 aaKnown RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 RNF144AP50876 292 aaPredicted RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 SIM1P81133 766 aaPredicted RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 CD83Q01151 205 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 CRYZQ08257 329 aaKnown RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 OCLNQ16625 522 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 IER5LQ5T953 404 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 GALNT10Q86SR1 603 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 OR4N5Q8IXE1 308 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 SPERTQ8NA61 448 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 OR2L8Q8NGY9 312 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 FRMD6Q96NE9 622 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 LRRN3Q9H3W5 708 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 SMOXQ9NWM0 555 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 PPP4R1LQ9P1A2 415 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 SLC22A31A6NKX4 558 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 L7N2F9 121 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 PLD2O14939 933 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 LILRB3O75022 631 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 STOMP27105 288 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 GNG2P59768 71 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 VAMP2P63027 116 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 ZNF852Q6ZMS4 543 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 SLC44A3Q8N4M1 653 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 SLC37A3Q8NCC5 494 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 SPATA6Q9NWH7 488 aaPredicted RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 HCSTQ9UBK5 93 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 TMEM14AQ9Y6G1 99 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 SH3PXD2BA1X283 911 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 FARS2O95363 451 aaKnown RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 ADAP00813 363 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 HNRNPA2B1P22626 353 aaKnown RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 CEBPGP53567 150 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 TMEM236Q5W0B7 351 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 FIGNL1Q6PIW4 674 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 ZNF551Q7Z340 670 aaPredicted RBP15.19■□□□□ 0.02
USP42-201ENST00000306177 VTCN1Q7Z7D3 282 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 ZNF283Q8N7M2 679 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 TMEM41AQ96HV5 264 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 MROQ9BYG7 248 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 CA14Q9ULX7 337 aa15.19■□□□□ 0.02
USP42-201ENST00000306177 LOC285095A0A1B0GVY8 99 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 VSTM5A8MXK1 200 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 DISC1C4P0D8 188 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 IL33O95760 270 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 THEGLP0DJG4 465 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 SHC2P98077 582 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 MAB21L1Q13394 359 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 GAS6Q14393 721 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 GRM7Q14831 915 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 HSD17B12Q53GQ0 312 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 ARHGAP11AQ6P4F7 1023 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 PAQR9Q6ZVX9 377 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms