RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 HNRNPFP52597 415 aaKnown RBP19.72■□□□□ 0.75
SMCO4-201ENST00000298966 NME5P56597 212 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 NIPAL1Q6NVV3 410 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 TLDC1Q6P9B6 456 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 PLD3Q8IV08 490 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 FAM20CQ8IXL6 584 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 ZCCHC7Q8N3Z6 543 aaKnown RBP19.72■□□□□ 0.75
SMCO4-201ENST00000298966 DPP10Q8N608 796 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 MS4A6EQ96DS6 147 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 ZNF764Q96H86 408 aaPredicted RBP19.72■□□□□ 0.75
SMCO4-201ENST00000298966 TSSK3Q96PN8 268 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 F2RL3Q96RI0 385 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 HOPXQ9BPY8 73 aaPredicted RBP19.72■□□□□ 0.75
SMCO4-201ENST00000298966 NDC1Q9BTX1 674 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 RMND5AQ9H871 391 aa19.72■□□□□ 0.75
SMCO4-201ENST00000298966 C15orf38-AP3S2A0A0A6YYH1 394 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 SCELO95171 688 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 SERPIND1P05546 499 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 COX6B1P14854 86 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 GABRA4P48169 554 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 CCNYL2Q5T2Q4 361 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 OR4C11Q6IEV9 310 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 RPUSD3Q6P087 351 aaKnown RBP19.71■□□□□ 0.75
SMCO4-201ENST00000298966 VN1R4Q7Z5H5 301 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 ARPINQ7Z6K5 226 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 TMEM151BQ8IW70 566 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 SCUBE1Q8IWY4 988 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 ULK2Q8IYT8 1036 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 DEFB107AQ8IZN7 70 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 OR8J2Q8NGG1 315 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMCO4-201ENST00000298966 ITLN2Q8WWU7 325 aaPredicted RBP19.71■□□□□ 0.75
SMCO4-201ENST00000298966 TEX37Q96LM6 180 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 NPAS2Q99743 824 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 THTPAQ9BU02 230 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 LHPPQ9H008 270 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 WDR41Q9HAD4 459 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 ATAD3AQ9NVI7 634 aa19.71■□□□□ 0.75
SMCO4-201ENST00000298966 ZFHX3Q15911 3703 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 NF1P21359 2839 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 A0A0J9YVX5 310 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 SCAMP2O15127 329 aaKnown RBP19.7■□□□□ 0.74
SMCO4-201ENST00000298966 HCRTR1O43613 425 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 TBX19O60806 448 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 CTSVO60911 334 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 PGRP06401 933 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 TACR1P25103 407 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 IL12AP29459 219 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 S100A3P33764 101 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 SSR2P43308 183 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 MAPK12P53778 367 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 SKP1P63208 163 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 HYAL2Q12891 473 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 HEPACAMQ14CZ8 416 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 SPATS1Q496A3 300 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 VPS26BQ4G0F5 336 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 TOR1AIP1Q5JTV8 583 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 ABHD17CQ6PCB6 329 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 PGM2L1Q6PCE3 622 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 BNC2Q6ZN30 1099 aaPredicted RBP19.7■□□□□ 0.74
SMCO4-201ENST00000298966 ABHD13Q7L211 337 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 GPR180Q86V85 440 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 TMEM132CQ8N3T6 1108 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 FAM13CQ8NE31 585 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 VPS37AQ8NEZ2 397 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 VPS50Q96JG6 964 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 EBPLQ9BY08 206 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 ZNF717Q9BY31 904 aaPredicted RBP19.7■□□□□ 0.74
SMCO4-201ENST00000298966 REEP4Q9H6H4 257 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 FAM120CQ9NX05 1096 aaKnown RBP19.7■□□□□ 0.74
SMCO4-201ENST00000298966 BAIAP2L1Q9UHR4 511 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 ATP6V1HQ9UI12 483 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 KLHL20Q9Y2M5 609 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 PCNX1Q96RV3 2341 aa19.7■□□□□ 0.74
SMCO4-201ENST00000298966 CSMD2Q7Z408 3487 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 ERI3O43414 337 aaKnown RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 KLK1P06870 262 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 ALAS2P22557 587 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 HTR1EP28566 365 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 TPP2P29144 1249 aaPredicted RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 HNRNPH1P31943 449 aaKnown RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 KIR3DL1P43629 444 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 RIPK1Q13546 671 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 TRMT5Q32P41 509 aaKnown RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 FAM174BQ3ZCQ3 159 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 VWA2Q5GFL6 755 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 WASHC2DQ5SRD0 308 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 ANXA8L1Q5VT79 327 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 C8orf82Q6P1X6 216 aaPredicted RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 ISLR2Q6UXK2 745 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 MRGPRGQ86SM5 289 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 ZNF808Q8N4W9 903 aaPredicted RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 C16orf78Q8WTQ4 265 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 FKBP10Q96AY3 582 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 COPS7BQ9H9Q2 264 aaPredicted RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 ENAMQ9NRM1 1142 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 LYARQ9NX58 379 aaKnown RBP19.69■□□□□ 0.74
SMCO4-201ENST00000298966 AP3M1Q9Y2T2 418 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 DCHS2Q6V1P9 2916 aa19.69■□□□□ 0.74
SMCO4-201ENST00000298966 A0A0A6YYD5 115 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms