RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FGF3P11487 239 aaPredicted RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 MSR1P21757 451 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 NR4A2P43354 598 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 LSSP48449 732 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 NCS1P62166 190 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ZNF763Q0D2J5 394 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 SF3B4Q15427 424 aaKnown RBP eCLIP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 RNASE10Q5GAN6 216 aaKnown RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 KANK2Q63ZY3 851 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 RFPL4BQ6ZWI9 263 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 LRRTM4Q86VH4 590 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 OR56B2PQ8NGI1 322 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 TWNKQ96RR1 684 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 CENPOQ9BU64 300 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 KCNS2Q9ULS6 477 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 A0A0A6YYH2 397 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 A0A0G2JMP0 313 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 A6NJ64 397 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ZNF705FA8MVS1 300 aaPredicted RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ZNF705DP0CH99 300 aaPredicted RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ZNF705BP0CI00 300 aaPredicted RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 STC1P52823 247 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 EXOC3L2Q2M3D2 409 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ATG9BQ674R7 924 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 PRSS55Q6UWB4 352 aaPredicted RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 CFAP77Q6ZQR2 320 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 P4HA3Q7Z4N8 544 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 TMEM156Q8N614 296 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 TXNDC5Q8NBS9 432 aaKnown RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 OR4M2Q8NGB6 313 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 OR8J3Q8NGG0 315 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 OR5M3Q8NGP4 307 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ELP5Q8TE02 316 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 SLC5A11Q8WWX8 675 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 COQ10AQ96MF6 247 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 HDHD5Q9BXW7 423 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 GKN1Q9NS71 199 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 MYH7BA7E2Y1 1941 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 MYH8P13535 1937 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 GLOD5A6NK44 160 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ANKRD66B4E2M5 251 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 FAAHO00519 579 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 CLEC3AO75596 197 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 DRD5P21918 477 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 PROZP22891 400 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 MYF6P23409 242 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ACVRL1P37023 503 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 KCNJ5P48544 419 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 NPRL3Q12980 569 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 ADGRF1Q5T601 910 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 CES4AQ5XG92 561 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 GPAT4Q86UL3 456 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 KLBQ86Z14 1044 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 PLD6Q8N2A8 252 aaKnown RBP10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 SIGLEC10Q96LC7 697 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 CCDC32Q9BV29 185 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.29□□□□□ -0.762e-10■■■■■ 29
PKNOX1-201ENST00000291547 ACSL5Q9ULC5 683 aa10.29□□□□□ -0.76
PKNOX1-201ENST00000291547 OTOL1A6NHN0 477 aaPredicted RBP10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 LRRTM2O43300 516 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 GRID2O43424 1007 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 AOC2O75106 756 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 CNTN5O94779 1100 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 RAB3BP20337 219 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 RPL10P27635 214 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 KDELR2P33947 212 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 ACTC1P68032 377 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 ACTA1P68133 377 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 SNTA1Q13424 505 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 GSG1LQ6UXU4 331 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 CILP2Q8IUL8 1156 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 ZFP41Q8N8Y5 198 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 KCNH6Q9H252 994 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 FBRSQ9HAH7 460 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 FANCFQ9NPI8 374 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 NDRG2Q9UN36 371 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 DHDHQ9UQ10 334 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 SOCS7O14512 581 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 SDHDO14521 159 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 ADAM23O75077 832 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 AKR1C4P17516 323 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 CTHP32929 405 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 CEACAM7Q14002 265 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 ABHD11Q8NFV4 315 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 OR10T2Q8NGX3 314 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 MSLNLQ96KJ4 702 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 WDR77Q9BQA1 342 aaPredicted RBP10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 DOHHQ9BU89 302 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 CD244Q9BZW8 370 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 TRBV2A0A0J9YWF9 115 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 VSTM5A8MXK1 200 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 ZNF821O75541 412 aaPredicted RBP10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 TSPAN15O95858 294 aa10.28□□□□□ -0.76
PKNOX1-201ENST00000291547 PAHP00439 452 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms