RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Hs6st1Q9QYK5 411 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 SqorQ9R112 450 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Myo15aQ9QZZ4 3511 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Klhl18A0A0G2JGN5 579 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 A0A286YD13 301 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Mamdc4A2AJA7 1228 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr549E9Q542 316 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Inpp5aE9QAS7 422 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Epha8O09127 1004 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 HgdO09173 445 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Hax1O35387 280 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 FkbplO35450 347 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pmm1O35621 262 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Syt3O35681 587 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cbfa2t3O54972 620 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 GfapP03995 430 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Nid1P10493 1245 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Nr5a2P45448 560 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Sox2P48432 319 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 VaspP70460 375 aaKnown RBP8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cct3P80318 545 aaKnown RBP8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Eps8Q08509 821 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ccbe1Q3MI99 408 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ulk3Q3U3Q1 472 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 C1orf109Q499E6 217 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Mup21Q80YX8 181 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 PpcdcQ8BZB2 204 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Nt5dc1Q8C5P5 467 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 TrhdeQ8K093 1025 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Lin28aQ8K3Y3 209 aaKnown RBP8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr583Q8VG25 319 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pcdhga12Q91XY7 932 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Atp6v1c2Q99L60 427 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Fars2Q99M01 451 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 GsdmcQ99NB5 468 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Chaf1bQ9D0N7 572 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 4933421I07RikQ9D420 214 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 EqtnQ9D9V2 337 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Stard5Q9EPQ7 213 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tas2r103Q9JKA3 312 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Chst11Q9JME2 352 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Mnx1Q9QZW9 404 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 HnrnpfQ9Z2X1 415 aaKnown RBP8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 B4galt2Q9Z2Y2 369 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dchs2A0A0A6YW72 3346 aa8.22□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm13040A2A8C4 496 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tceal7A3KGA4 98 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tnfrsf25B1AWN9 411 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm7945F6QI24 236 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 B3galt2O54905 422 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 CgaP01216 120 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gpx5P21765 221 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Drd2P61168 444 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 NfycP70353 335 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 C1qaP98086 245 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cds1P98191 461 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Crisp1Q03401 244 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 NkaplQ5SZT7 395 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Thoc6Q5U4D9 341 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Kir3dl2Q673W2 388 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 TxlngQ8BHN1 524 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ppp1r3bQ8C767 284 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 EfhbQ8CDU5 853 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ppwd1Q8CEC6 646 aaKnown RBP8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 PxnQ8VI36 591 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cts7Q91ZF2 331 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tmem159Q922Z1 161 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Nkd1Q99MH6 471 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ist1Q9CX00 362 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dsn1Q9CYC5 348 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 CenpnQ9CZW2 337 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Trmt5Q9D0C4 501 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Lypd6bQ9D7F2 191 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tnfrsf22Q9ER62 198 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Osbpl10S4R1M9 766 aa8.21□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr671A0A1B0GSN5 317 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm30302A0A1Y7VN40 1110 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ankle1A8VU90 534 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Zfp282E9PVC2 666 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 NapsaO09043 419 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 S100a5P63084 93 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc30a3P97441 388 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pla2g7Q60963 440 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Lasp1Q61792 263 aaKnown RBP8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mrps35Q8BJZ4 320 aaKnown RBP8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ablim2Q8BL65 612 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gpr152Q8BXS7 511 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Abhd18Q8C1A9 464 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Dcaf12l1Q8CBW4 501 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Sirt4Q8R216 333 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ptgr2Q8VDQ1 351 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr1033Q8VFK5 310 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gorasp1Q91X51 446 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 AassQ99K67 926 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Use1Q9CQ56 270 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Cxxc1Q9CWW7 660 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Psmd8Q9CX56 353 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ccdc77Q9CZH8 489 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Efcab1Q9D3N2 212 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Clic3Q9D7P7 237 aa8.21□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms