RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 CrtapQ9CYD3 400 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Vsig1Q9D2J4 407 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Slc15a1Q9JIP7 709 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Bco1Q9JJS6 566 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Pex14Q9R0A0 376 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Abca15E9PWH4 1668 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ces2hF6Z9B9 558 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Bcl2l11O54918 196 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Cd83O88324 196 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Slc1a5P51912 553 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Vamp2P63044 116 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Cyb5r2Q3KNK3 276 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Gpr174Q3U507 335 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Foxr1Q3UTB7 268 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Dcdc2Q5DU00 475 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 PigaQ64323 485 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Zmiz1Q6P1E1 1072 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Olfr855Q7TRF8 312 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Otop1Q80VM9 600 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Gtf2a2Q80ZM7 109 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Nudt15Q8BG93 170 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Smoc2Q8CD91 447 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Olfr1019Q8VGS3 310 aa16.07■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Zfp982A2A8Q4 368 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ifngr1P15261 477 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Rras2P62071 204 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Sult4a1P63046 284 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 PrkcgP63318 697 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Plpp4Q0VBU9 271 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Garem1Q3UFT3 876 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Snx33Q4VAA7 574 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 CilpQ66K08 1184 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Npas4Q8BGD7 802 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Vmn1r229Q8R2A9 306 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Rnf130Q8VEM1 419 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Prss16Q9QXE5 509 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Dpy19l1A6X919 746 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Vmn2r116E9Q6I0 856 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 OpcmlG5E8G3 345 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Il1bP10749 269 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Fli1P26323 452 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Etv4P28322 485 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Hsf1P38532 525 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Kcnj9P48543 393 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 PrkczQ02956 592 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Fscn2Q32M02 492 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Gm527Q4KL13 310 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 C8bQ8BH35 589 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Trmt10aQ8C1Z8 328 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Dpep2Q8C255 478 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Tubg2Q8VCK3 451 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 EedQ921E6 441 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Eif4e3Q9DBB5 207 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Enthd1E9Q1Z2 618 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Olfr294F7CWV4 335 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Phb2O35129 299 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Cd2P08920 344 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Tgfb3P17125 410 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Slc30a3P97441 388 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Hoxd1Q01822 328 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Mrpl10Q3TBW2 262 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Tmem102Q3UPR7 509 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ephx3Q3V1F8 367 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Scn2bQ56A07 215 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ranbp3lQ6PDH4 491 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Nt5dc1Q8C5P5 467 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Bclaf1Q8K019 919 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Vmn1r215Q8R264 300 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Gtpbp3Q923K4 492 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 DnpepQ9Z2W0 473 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Scn4aQ9ER60 1841 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Skint4A7TZF3 474 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Pate3B3GLJ3 98 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 AcadmP45952 421 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Atxn1P54254 791 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Il10rbQ61190 349 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Supv3l1Q80YD1 779 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Shc2Q8BMC3 573 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Cep68Q8C0D9 733 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Grsf1Q8C5Q4 479 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Mmp28Q8CGV8 520 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Fbxl8Q8CIG9 374 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 SpartQ8R1X6 671 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Olfr1461Q8VEV7 312 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Rwdd3Q8VIL2 267 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Papd4Q91YI6 484 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Npm3Q9CPP0 175 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Dph2Q9CR25 489 aa16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Mrpl21Q9D1N9 209 aaKnown RBP16.06■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Slc37a4A0A1L1SUI3 450 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ighg3A0A1Y7VJN6 399 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Slc30a4O35149 430 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Irf1P15314 329 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Pou2f1P25425 770 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ap1s1P61967 158 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 PgrQ00175 926 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Brf2Q3UAW9 420 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ccdc106Q3ULM0 279 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Ces2bQ6PDB7 556 aa16.05■□□□□ 0.16
Col17a1-201ENSMUST00000026045 Vangl1Q80Z96 526 aa16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms