RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC22	YLR268W	IRC10	Q08118	586 aa		4.24	□□□□□ -1.73
SEC22	YLR268W	ACF2	Q12168	779 aa		4.24	□□□□□ -1.73
SEC22	YLR268W	YPL066W	Q12194	479 aa		4.24	□□□□□ -1.73
SEC22	YLR268W	TRP4	P07285	380 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC22	YLR268W	ERG4	P25340	473 aa		4.23	□□□□□ -1.73
SEC22	YLR268W	RPC82	P32349	654 aa		4.23	□□□□□ -1.73
SEC22	YLR268W	DUT1	P33317	147 aa		4.23	□□□□□ -1.73
SEC22	YLR268W	CUE2	P36075	443 aa	Known RBP	4.23	□□□□□ -1.73
SEC22	YLR268W	INO1	P11986	533 aa		4.22	□□□□□ -1.73
SEC22	YLR268W	YKL107W	P34251	309 aa		4.22	□□□□□ -1.73
SEC22	YLR268W	FYV10	P40492	516 aa		4.22	□□□□□ -1.73
SEC22	YLR268W	POL32	P47110	350 aa		4.22	□□□□□ -1.73
SEC22	YLR268W	STB4	P50104	949 aa		4.22	□□□□□ -1.73
SEC22	YLR268W	RMD1	Q03441	430 aa		4.22	□□□□□ -1.73
SEC22	YLR268W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SEC22	YLR268W	SNF7	P39929	240 aa	Known RBP	4.21	□□□□□ -1.74
SEC22	YLR268W	TYW3	P53177	273 aa		4.21	□□□□□ -1.74
SEC22	YLR268W	RNT1	Q02555	471 aa		4.21	□□□□□ -1.74
SEC22	YLR268W	EEB1	Q02891	456 aa		4.21	□□□□□ -1.74
SEC22	YLR268W	TAF7	Q05021	590 aa		4.21	□□□□□ -1.74
SEC22	YLR268W	UPC2	Q12151	913 aa		4.21	□□□□□ -1.74
SEC22	YLR268W	CAD1	P24813	409 aa	Known RBP	4.2	□□□□□ -1.74
SEC22	YLR268W	WHI4	Q07655	649 aa	Known RBP	4.2	□□□□□ -1.74
SEC22	YLR268W	ATE1	P16639	503 aa		4.19	□□□□□ -1.74
SEC22	YLR268W	MOT2	P34909	587 aa	Known RBP	4.19	□□□□□ -1.74
SEC22	YLR268W	YGL176C	P46945	554 aa		4.19	□□□□□ -1.74
SEC22	YLR268W	LGE1	Q02796	332 aa	Known RBP	4.19	□□□□□ -1.74
SEC22	YLR268W	RRP15	Q06511	250 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC22	YLR268W	PPR1	P07272	904 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC22	YLR268W	CDC34	P14682	295 aa		4.18	□□□□□ -1.74
SEC22	YLR268W	STE14	P32584	239 aa		4.18	□□□□□ -1.74
SEC22	YLR268W	MTH1	P35198	433 aa		4.18	□□□□□ -1.74
SEC22	YLR268W	NPP2	P39997	493 aa		4.18	□□□□□ -1.74
SEC22	YLR268W	MET10	P39692	1035 aa		4.17	□□□□□ -1.74
SEC22	YLR268W	NDJ1	Q12366	352 aa		4.17	□□□□□ -1.74
SEC22	YLR268W	SED4	P25365	1065 aa		4.16	□□□□□ -1.74
SEC22	YLR268W	CDC12	P32468	407 aa	Known RBP	4.16	□□□□□ -1.74
SEC22	YLR268W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SEC22	YLR268W	SAH1	P39954	449 aa	Known RBP	4.16	□□□□□ -1.74
SEC22	YLR268W	ERG5	P54781	538 aa		4.16	□□□□□ -1.74
SEC22	YLR268W	SPO20	Q04359	397 aa		4.16	□□□□□ -1.74
SEC22	YLR268W	ALG7	P07286	448 aa		4.15	□□□□□ -1.75
SEC22	YLR268W	GND2	P53319	492 aa		4.15	□□□□□ -1.75
SEC22	YLR268W	SFB2	P53953	876 aa		4.15	□□□□□ -1.75
SEC22	YLR268W	SLU7	Q02775	382 aa	Known RBP	4.15	□□□□□ -1.75
SEC22	YLR268W	SRP1	Q02821	542 aa	Known RBP	4.15	□□□□□ -1.75
SEC22	YLR268W	MUK1	Q02866	612 aa		4.15	□□□□□ -1.75
SEC22	YLR268W	YMR206W	Q03695	313 aa		4.15	□□□□□ -1.75
SEC22	YLR268W	SPC42	P36094	363 aa		4.14	□□□□□ -1.75
SEC22	YLR268W	YKR078W	P36158	585 aa	Known RBP	4.14	□□□□□ -1.75
SEC22	YLR268W	GYP7	P48365	746 aa		4.14	□□□□□ -1.75
SEC22	YLR268W	RAI1	P53063	387 aa	Known RBP	4.14	□□□□□ -1.75
SEC22	YLR268W	PET112	P33893	541 aa		4.13	□□□□□ -1.75
SEC22	YLR268W	SDS3	P40505	327 aa		4.13	□□□□□ -1.75
SEC22	YLR268W	YLR225C	Q05948	407 aa	Known RBP	4.13	□□□□□ -1.75
SEC22	YLR268W	HBT1	Q07653	1046 aa	Known RBP	4.13	□□□□□ -1.75
SEC22	YLR268W	TRM13	Q12383	476 aa		4.13	□□□□□ -1.75
SEC22	YLR268W	MNR2	P35724	969 aa		4.12	□□□□□ -1.75
SEC22	YLR268W	YBR238C	P38330	731 aa	Known RBP	4.12	□□□□□ -1.75
SEC22	YLR268W	YER158C	P40095	573 aa		4.12	□□□□□ -1.75
SEC22	YLR268W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SEC22	YLR268W	DAS1	P47005	663 aa		4.1	□□□□□ -1.75
SEC22	YLR268W	YKE2	P52553	114 aa		4.1	□□□□□ -1.75
SEC22	YLR268W	FBP1	P09201	348 aa		4.09	□□□□□ -1.75
SEC22	YLR268W	YHL017W	P38745	532 aa		4.09	□□□□□ -1.75
SEC22	YLR268W	KRI1	P42846	591 aa	Known RBP	4.09	□□□□□ -1.75
SEC22	YLR268W	YGR053C	P53234	283 aa		4.09	□□□□□ -1.75
SEC22	YLR268W	YPR196W	Q06595	470 aa		4.09	□□□□□ -1.75
SEC22	YLR268W	PEX19	Q07418	342 aa		4.09	□□□□□ -1.75
SEC22	YLR268W	FRE5	Q08908	694 aa		4.09	□□□□□ -1.75
SEC22	YLR268W	MET3	P08536	511 aa		4.08	□□□□□ -1.76
SEC22	YLR268W	CDC48	P25694	835 aa	Known RBP	4.08	□□□□□ -1.76
SEC22	YLR268W	SEC21	P32074	935 aa	Known RBP	4.08	□□□□□ -1.76
SEC22	YLR268W	CTF13	P35203	478 aa		4.08	□□□□□ -1.76
SEC22	YLR268W	TSL1	P38427	1098 aa	Known RBP	4.08	□□□□□ -1.76
SEC22	YLR268W	ESC2	Q06340	456 aa		4.08	□□□□□ -1.76
SEC22	YLR268W	ASF1	P32447	279 aa		4.07	□□□□□ -1.76
SEC22	YLR268W	STE13	P33894	931 aa		4.07	□□□□□ -1.76
SEC22	YLR268W	PPS1	P38148	807 aa		4.07	□□□□□ -1.76
SEC22	YLR268W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SEC22	YLR268W	DUS3	Q06053	668 aa	Known RBP	4.07	□□□□□ -1.76
SEC22	YLR268W	MRH1	Q12117	320 aa	Predicted RBP	4.07	□□□□□ -1.76
SEC22	YLR268W	TRM11	Q12463	433 aa		4.07	□□□□□ -1.76
SEC22	YLR268W	NOT3	P06102	836 aa	Known RBP	4.06	□□□□□ -1.76
SEC22	YLR268W	SBA1	P28707	216 aa	Known RBP	4.06	□□□□□ -1.76
SEC22	YLR268W	ELO3	P40319	345 aa		4.06	□□□□□ -1.76
SEC22	YLR268W	SDP1	P40479	209 aa		4.06	□□□□□ -1.76
SEC22	YLR268W	DLT1	Q04216	342 aa		4.06	□□□□□ -1.76
SEC22	YLR268W	ADY4	Q05955	493 aa		4.06	□□□□□ -1.76
SEC22	YLR268W	GFA1	P14742	717 aa	Known RBP	4.05	□□□□□ -1.76
SEC22	YLR268W	HEM3	P28789	327 aa		4.05	□□□□□ -1.76
SEC22	YLR268W	ABD1	P32783	436 aa	Predicted RBP	4.05	□□□□□ -1.76
SEC22	YLR268W	COQ11	Q05892	277 aa		4.05	□□□□□ -1.76
SEC22	YLR268W	SUT2	Q12286	268 aa		4.05	□□□□□ -1.76
SEC22	YLR268W	TUB3	P09734	445 aa	Known RBP	4.04	□□□□□ -1.76
SEC22	YLR268W	AGP1	P25376	633 aa		4.04	□□□□□ -1.76
SEC22	YLR268W	ILV6	P25605	309 aa	Known RBP	4.04	□□□□□ -1.76
SEC22	YLR268W	CTF8	P38877	133 aa		4.04	□□□□□ -1.76
SEC22	YLR268W	MBP1	P39678	833 aa		4.04	□□□□□ -1.76
SEC22	YLR268W	IMO32	P53219	342 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms