RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W TMT1P32643 299 aa11.29□□□□□ -0.6
UBA4YHR111W COT1P32798 439 aa11.29□□□□□ -0.6
UBA4YHR111W BUD2P33314 1104 aa11.29□□□□□ -0.6
UBA4YHR111W PGM2P37012 569 aaKnown RBP11.29□□□□□ -0.6
UBA4YHR111W RTT102P53330 157 aa11.29□□□□□ -0.6
UBA4YHR111W IES4Q08561 116 aa11.29□□□□□ -0.6
UBA4YHR111W ADE2P21264 571 aaKnown RBP11.28□□□□□ -0.6
UBA4YHR111W PCD1Q12524 340 aa11.28□□□□□ -0.6
UBA4YHR111W RPC53P25441 422 aa11.27□□□□□ -0.61
UBA4YHR111W BMH1P29311 267 aaKnown RBP11.27□□□□□ -0.61
UBA4YHR111W DPH2P32461 534 aa11.27□□□□□ -0.61
UBA4YHR111W RFT1P38206 574 aaPredicted RBP11.27□□□□□ -0.61
UBA4YHR111W VTC2P43585 828 aa11.27□□□□□ -0.61
UBA4YHR111W CAF130P53280 1122 aaPredicted RBP11.27□□□□□ -0.61
UBA4YHR111W YNL146WP53906 100 aa11.27□□□□□ -0.61
UBA4YHR111W YNL134CP53912 376 aaKnown RBP11.27□□□□□ -0.61
UBA4YHR111W EMI2Q04409 500 aaKnown RBP11.27□□□□□ -0.61
UBA4YHR111W PSR2Q07949 397 aa11.27□□□□□ -0.61
UBA4YHR111W OSW2Q12202 724 aa11.27□□□□□ -0.61
UBA4YHR111W YDR034W-BQ6Q5X2 51 aa11.27□□□□□ -0.61
UBA4YHR111W MSD1P15179 658 aaKnown RBP11.26□□□□□ -0.61
UBA4YHR111W PPS1P38148 807 aa11.26□□□□□ -0.61
UBA4YHR111W SLX1P38324 304 aa11.26□□□□□ -0.61
UBA4YHR111W UBX7P38349 436 aa11.26□□□□□ -0.61
UBA4YHR111W OPT1P40897 799 aa11.26□□□□□ -0.61
UBA4YHR111W TOF1P53840 1238 aa11.26□□□□□ -0.61
UBA4YHR111W SEC5P89102 971 aa11.26□□□□□ -0.61
UBA4YHR111W PEX19Q07418 342 aa11.26□□□□□ -0.61
UBA4YHR111W TIF1P10081 395 aaKnown RBP11.25□□□□□ -0.61
UBA4YHR111W VPS35P34110 944 aa11.25□□□□□ -0.61
UBA4YHR111W YAP1801P38856 637 aa11.25□□□□□ -0.61
UBA4YHR111W MNP1P53163 194 aaPredicted RBP11.25□□□□□ -0.61
UBA4YHR111W DOT1Q04089 582 aaKnown RBP11.25□□□□□ -0.61
UBA4YHR111W YDL057WQ07379 328 aa11.25□□□□□ -0.61
UBA4YHR111W HIR1P32479 840 aa11.24□□□□□ -0.61
UBA4YHR111W YSC83P32792 385 aa11.24□□□□□ -0.61
UBA4YHR111W YHL026CP38740 315 aa11.24□□□□□ -0.61
UBA4YHR111W BDH2P39713 417 aa11.24□□□□□ -0.61
UBA4YHR111W LAM5P43560 674 aa11.24□□□□□ -0.61
UBA4YHR111W CUL3P53202 744 aa11.24□□□□□ -0.61
UBA4YHR111W YDR090CQ03193 310 aa11.24□□□□□ -0.61
UBA4YHR111W YLR455WQ06188 304 aa11.24□□□□□ -0.61
UBA4YHR111W CUR1Q06469 252 aa11.24□□□□□ -0.61
UBA4YHR111W SPT2P06843 333 aaPredicted RBP11.23□□□□□ -0.61
UBA4YHR111W PCK1P10963 549 aa11.23□□□□□ -0.61
UBA4YHR111W CDC15P27636 974 aa11.23□□□□□ -0.61
UBA4YHR111W NAM7P30771 971 aaKnown RBP11.23□□□□□ -0.61
UBA4YHR111W UBP13P38187 747 aa11.23□□□□□ -0.61
UBA4YHR111W FMP10P40098 244 aa11.23□□□□□ -0.61
UBA4YHR111W ALT2P52892 507 aa11.23□□□□□ -0.61
UBA4YHR111W TAM41P53230 385 aa11.23□□□□□ -0.61
UBA4YHR111W HST1P53685 503 aa11.23□□□□□ -0.61
UBA4YHR111W ADE4P04046 510 aaKnown RBP11.22□□□□□ -0.61
UBA4YHR111W GLN3P18494 730 aa11.22□□□□□ -0.61
UBA4YHR111W SSD1P24276 1250 aaKnown RBP RIP-Chip data11.22□□□□□ -0.61not detected
UBA4YHR111W VID24P38263 362 aa11.22□□□□□ -0.61
UBA4YHR111W ESL1P40456 1118 aa11.22□□□□□ -0.61
UBA4YHR111W MET13P53128 600 aa11.22□□□□□ -0.61
UBA4YHR111W ENV11P53246 860 aa11.22□□□□□ -0.61
UBA4YHR111W ECM7Q06200 448 aa11.22□□□□□ -0.61
UBA4YHR111W YPL277CQ08989 487 aa11.22□□□□□ -0.61
UBA4YHR111W LSP1Q12230 341 aaKnown RBP11.22□□□□□ -0.61
UBA4YHR111W IDI1P15496 288 aa11.21□□□□□ -0.61
UBA4YHR111W SKG6P32900 734 aaPredicted RBP11.21□□□□□ -0.61
UBA4YHR111W MNN4P36044 1178 aa11.21□□□□□ -0.61
UBA4YHR111W MRX3P38172 270 aa11.21□□□□□ -0.61
UBA4YHR111W BUD16P39988 312 aa11.21□□□□□ -0.61
UBA4YHR111W HYR1P40581 163 aaKnown RBP11.21□□□□□ -0.61
UBA4YHR111W YFL034WP43564 1073 aa11.21□□□□□ -0.61
UBA4YHR111W VTC3Q02725 835 aa11.21□□□□□ -0.61
UBA4YHR111W HEH2Q03281 663 aa11.21□□□□□ -0.61
UBA4YHR111W ZPS1Q12512 249 aa11.21□□□□□ -0.61
UBA4YHR111W COX4P04037 155 aa11.2□□□□□ -0.62
UBA4YHR111W APN2P38207 520 aa11.2□□□□□ -0.62
UBA4YHR111W PNG1Q02890 363 aa11.2□□□□□ -0.62
UBA4YHR111W YMR084WA2P2R3 262 aa11.19□□□□□ -0.62
UBA4YHR111W TOM70P07213 617 aaKnown RBP11.19□□□□□ -0.62
UBA4YHR111W RPT1P33299 467 aaKnown RBP11.19□□□□□ -0.62
UBA4YHR111W CSE2P33308 149 aa11.19□□□□□ -0.62
UBA4YHR111W YEL1P34225 687 aa11.19□□□□□ -0.62
UBA4YHR111W INP52P50942 1183 aa11.19□□□□□ -0.62
UBA4YHR111W TRS130Q03660 1102 aa11.19□□□□□ -0.62
UBA4YHR111W YOR022CQ12204 715 aa11.19□□□□□ -0.62
UBA4YHR111W PRC1P00729 532 aa11.18□□□□□ -0.62
UBA4YHR111W PHO8P11491 566 aa11.18□□□□□ -0.62
UBA4YHR111W DAL7P21826 554 aa11.18□□□□□ -0.62
UBA4YHR111W ADK2P26364 225 aa11.18□□□□□ -0.62
UBA4YHR111W URK1P27515 501 aa11.18□□□□□ -0.62
UBA4YHR111W ELM1P32801 640 aa11.18□□□□□ -0.62
UBA4YHR111W MRPL7P36519 292 aa11.18□□□□□ -0.62
UBA4YHR111W NBP1P52919 319 aaPredicted RBP11.18□□□□□ -0.62
UBA4YHR111W SHE10P53075 577 aa11.18□□□□□ -0.62
UBA4YHR111W DDP1Q99321 188 aaKnown RBP11.18□□□□□ -0.62
UBA4YHR111W POL3P15436 1097 aa11.17□□□□□ -0.62
UBA4YHR111W SNF7P39929 240 aaKnown RBP11.17□□□□□ -0.62
UBA4YHR111W BIM1P40013 344 aa11.17□□□□□ -0.62
UBA4YHR111W CCT5P40413 562 aaKnown RBP11.17□□□□□ -0.62
UBA4YHR111W ISM1P48526 1002 aa11.17□□□□□ -0.62
UBA4YHR111W ORC5P50874 479 aa11.17□□□□□ -0.62
UBA4YHR111W TLG2Q08144 397 aa11.17□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms