RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W CLB5P30283 435 aa16.55■□□□□ 0.24
RTC3YHR087W RPC25P35718 212 aa16.55■□□□□ 0.24
RTC3YHR087W UIP5P36137 443 aa16.55■□□□□ 0.24
RTC3YHR087W SSB2P40150 613 aaKnown RBP16.55■□□□□ 0.24
RTC3YHR087W SHQ1P40486 507 aaPredicted RBP16.55■□□□□ 0.24
RTC3YHR087W YAP5P40574 245 aa16.55■□□□□ 0.24
RTC3YHR087W NBP1P52919 319 aaPredicted RBP16.55■□□□□ 0.24
RTC3YHR087W CAF130P53280 1122 aaPredicted RBP16.55■□□□□ 0.24
RTC3YHR087W UTP5Q04177 643 aaKnown RBP16.55■□□□□ 0.24
RTC3YHR087W YDL057WQ07379 328 aa16.55■□□□□ 0.24
RTC3YHR087W SUT2Q12286 268 aa16.55■□□□□ 0.24
RTC3YHR087W SAM1P10659 382 aaKnown RBP16.54■□□□□ 0.24
RTC3YHR087W SUP45P12385 437 aaKnown RBP16.54■□□□□ 0.24
RTC3YHR087W STE11P23561 717 aa16.54■□□□□ 0.24
RTC3YHR087W RRP43P25359 394 aaPredicted RBP16.54■□□□□ 0.24
RTC3YHR087W MCR1P36060 302 aaKnown RBP16.54■□□□□ 0.24
RTC3YHR087W UBP5P39944 805 aa16.54■□□□□ 0.24
RTC3YHR087W DIP5P53388 608 aa16.54■□□□□ 0.24
RTC3YHR087W PET123P17558 318 aa16.53■□□□□ 0.24
RTC3YHR087W PKC1P24583 1151 aa16.53■□□□□ 0.24
RTC3YHR087W MRF1P30775 413 aaPredicted RBP16.53■□□□□ 0.24
RTC3YHR087W STO1P34160 861 aaKnown RBP16.53■□□□□ 0.24
RTC3YHR087W MCX1P38323 520 aaPredicted RBP16.53■□□□□ 0.24
RTC3YHR087W TCD1P38756 429 aa16.53■□□□□ 0.24
RTC3YHR087W ATG3P40344 310 aa16.53■□□□□ 0.24
RTC3YHR087W FIS1P40515 155 aa16.53■□□□□ 0.24
RTC3YHR087W YAF9P53930 226 aa16.53■□□□□ 0.24
RTC3YHR087W FMP30Q02883 468 aa16.53■□□□□ 0.24
RTC3YHR087W UME1Q03010 460 aa16.53■□□□□ 0.24
RTC3YHR087W SFI1Q12369 946 aa16.53■□□□□ 0.24
RTC3YHR087W SPO12P17123 173 aa16.52■□□□□ 0.24
RTC3YHR087W PRE10P21242 288 aaKnown RBP RIP-Chip data16.52■□□□□ 0.24not detected
RTC3YHR087W EUG1P32474 517 aa16.52■□□□□ 0.24
RTC3YHR087W SMC2P38989 1170 aaKnown RBP16.52■□□□□ 0.24
RTC3YHR087W GPB2P39717 880 aa16.52■□□□□ 0.24
RTC3YHR087W MET7Q08645 548 aa16.52■□□□□ 0.24
RTC3YHR087W PPR1P07272 904 aaPredicted RBP16.51■□□□□ 0.23
RTC3YHR087W TCP1P12612 559 aaKnown RBP16.51■□□□□ 0.23
RTC3YHR087W UBC1P21734 215 aaKnown RBP16.51■□□□□ 0.23
RTC3YHR087W TRK2P28584 889 aa16.51■□□□□ 0.23
RTC3YHR087W MDM20Q12387 796 aaKnown RBP16.51■□□□□ 0.23
RTC3YHR087W MTF2P10849 440 aa16.5■□□□□ 0.23
RTC3YHR087W PGM2P37012 569 aaKnown RBP16.5■□□□□ 0.23
RTC3YHR087W AFG3P39925 761 aa16.5■□□□□ 0.23
RTC3YHR087W RPN3P40016 523 aaKnown RBP16.5■□□□□ 0.23
RTC3YHR087W EFM4P40516 257 aa16.5■□□□□ 0.23
RTC3YHR087W SMC3P47037 1230 aa16.5■□□□□ 0.23
RTC3YHR087W ZPR1P53303 486 aaKnown RBP16.5■□□□□ 0.23
RTC3YHR087W BRE5P53741 515 aaKnown RBP16.5■□□□□ 0.23
RTC3YHR087W YOL098CQ12496 1037 aa16.5■□□□□ 0.23
RTC3YHR087W DAL7P21826 554 aa16.49■□□□□ 0.23
RTC3YHR087W UBP13P38187 747 aa16.49■□□□□ 0.23
RTC3YHR087W FIG4P42837 879 aa16.49■□□□□ 0.23
RTC3YHR087W HUL5P53119 910 aa16.49■□□□□ 0.23
RTC3YHR087W SML1Q04964 104 aa16.49■□□□□ 0.23
RTC3YHR087W DUS3Q06053 668 aaKnown RBP16.49■□□□□ 0.23
RTC3YHR087W OPY2Q06810 360 aa16.49■□□□□ 0.23
RTC3YHR087W CDC19P00549 500 aaKnown RBP16.48■□□□□ 0.23
RTC3YHR087W YEL043WP32618 956 aa16.48■□□□□ 0.23
RTC3YHR087W UTR4P32626 227 aa16.48■□□□□ 0.23
RTC3YHR087W KTR2P33550 425 aa16.48■□□□□ 0.23
RTC3YHR087W SEC9P40357 651 aa16.48■□□□□ 0.23
RTC3YHR087W NDC80P40460 691 aa16.48■□□□□ 0.23
RTC3YHR087W SDS3P40505 327 aa16.48■□□□□ 0.23
RTC3YHR087W ULP2P40537 1034 aaPredicted RBP16.48■□□□□ 0.23
RTC3YHR087W CCM1P48237 864 aaPredicted RBP16.48■□□□□ 0.23
RTC3YHR087W BOP3P53958 396 aa16.48■□□□□ 0.23
RTC3YHR087W MCM16Q12262 181 aa16.48■□□□□ 0.23
RTC3YHR087W RKM4Q12504 494 aa16.48■□□□□ 0.23
RTC3YHR087W PHO8P11491 566 aa16.47■□□□□ 0.23
RTC3YHR087W VMA2P16140 517 aaKnown RBP16.47■□□□□ 0.23
RTC3YHR087W PDC6P26263 563 aaKnown RBP16.47■□□□□ 0.23
RTC3YHR087W DPB3P27344 201 aa16.47■□□□□ 0.23
RTC3YHR087W COS5P47187 383 aa16.47■□□□□ 0.23
RTC3YHR087W MAL13P53338 473 aa16.47■□□□□ 0.23
RTC3YHR087W TOF1P53840 1238 aa16.47■□□□□ 0.23
RTC3YHR087W NCS2P53923 493 aaPredicted RBP16.47■□□□□ 0.23
RTC3YHR087W GIR2Q03768 265 aaPredicted RBP16.47■□□□□ 0.23
RTC3YHR087W VAC14Q06708 880 aa16.47■□□□□ 0.23
RTC3YHR087W CRD1Q07560 283 aa16.47■□□□□ 0.23
RTC3YHR087W FAL1Q12099 399 aaKnown RBP16.47■□□□□ 0.23
RTC3YHR087W BUD16P39988 312 aa16.46■□□□□ 0.23
RTC3YHR087W HMF1P40037 129 aaKnown RBP16.46■□□□□ 0.23
RTC3YHR087W YJR107WP47145 328 aa16.46■□□□□ 0.23
RTC3YHR087W YGR125WP53273 1036 aa16.46■□□□□ 0.23
RTC3YHR087W ARK1P53974 638 aa16.46■□□□□ 0.23
RTC3YHR087W YPR078CQ06813 372 aa16.46■□□□□ 0.23
RTC3YHR087W HXT1P32465 570 aa16.45■□□□□ 0.22
RTC3YHR087W SRB4P32569 687 aa16.45■□□□□ 0.22
RTC3YHR087W IES1P43579 692 aa16.45■□□□□ 0.22
RTC3YHR087W RLP24Q07915 199 aaKnown RBP16.45■□□□□ 0.22
RTC3YHR087W DAS2Q12084 232 aa16.45■□□□□ 0.22
RTC3YHR087W TUP1P16649 713 aa16.44■□□□□ 0.22
RTC3YHR087W RAD57P25301 460 aa16.44■□□□□ 0.22
RTC3YHR087W YSC83P32792 385 aa16.44■□□□□ 0.22
RTC3YHR087W SEC8P32855 1065 aa16.44■□□□□ 0.22
RTC3YHR087W SHP1P34223 423 aa16.44■□□□□ 0.22
RTC3YHR087W RRP1P35178 278 aaPredicted RBP16.44■□□□□ 0.22
RTC3YHR087W CAB3P36076 571 aa16.44■□□□□ 0.22
RTC3YHR087W MAM3Q12296 706 aa16.44■□□□□ 0.22
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms