RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeast

Gene OTU1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OTU1	YFL044C	CFT2	Q12102	859 aa	Predicted RBP	4.59	□□□□□ -1.67
OTU1	YFL044C	GLO4	Q12320	285 aa		4.59	□□□□□ -1.67
OTU1	YFL044C	MRP10	O75012	95 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	GPM1	P00950	247 aa	Known RBP	4.58	□□□□□ -1.68
OTU1	YFL044C	RPP0	P05317	312 aa	Known RBP	4.58	□□□□□ -1.68
OTU1	YFL044C	RPS19A	P07280	144 aa	Known RBP	4.58	□□□□□ -1.68
OTU1	YFL044C	RPS19B	P07281	144 aa	Predicted RBP	4.58	□□□□□ -1.68
OTU1	YFL044C	PDC5	P16467	563 aa	Known RBP	4.58	□□□□□ -1.68
OTU1	YFL044C	RAD24	P32641	659 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	YKL091C	P33324	310 aa	Known RBP	4.58	□□□□□ -1.68
OTU1	YFL044C	DUR3	P33413	735 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	WHI3	P34761	661 aa	Known RBP	4.58	□□□□□ -1.68
OTU1	YFL044C	SQT1	P35184	431 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	RIM11	P38615	370 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	FAR11	P53917	953 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	YPL109C	Q02981	657 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	SOG2	Q08817	791 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	ICL2	Q12031	575 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	IRA2	P19158	3079 aa		4.58	□□□□□ -1.68
OTU1	YFL044C	HIP1	P06775	603 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	CIT2	P08679	460 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	SEC18	P18759	758 aa	Known RBP	4.57	□□□□□ -1.68
OTU1	YFL044C	NPR1	P22211	790 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	PPG1	P32838	368 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	MDJ1	P35191	511 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	PTK1	P36002	662 aa	Predicted RBP	4.57	□□□□□ -1.68
OTU1	YFL044C	MCD4	P36051	919 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	TFA2	P36145	328 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	ACA1	P39970	489 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	MXR1	P40029	184 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	LYS14	P40971	790 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	YFL040W	P43562	540 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	YJR124C	P47159	448 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	GUP1	P53154	560 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	CWC24	P53769	259 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	FMP30	Q02883	468 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	ADI1	Q03677	179 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	AHC1	Q12433	566 aa		4.57	□□□□□ -1.68
OTU1	YFL044C	CMR1	Q12510	522 aa	Known RBP	4.57	□□□□□ -1.68
OTU1	YFL044C	CYB2	P00175	591 aa		4.56	□□□□□ -1.68
OTU1	YFL044C	MNR2	P35724	969 aa		4.56	□□□□□ -1.68
OTU1	YFL044C	YBL028C	P38202	106 aa		4.56	□□□□□ -1.68
OTU1	YFL044C	SHU2	P38957	223 aa		4.56	□□□□□ -1.68
OTU1	YFL044C	NEO1	P40527	1151 aa		4.56	□□□□□ -1.68
OTU1	YFL044C	LEM3	P42838	414 aa		4.56	□□□□□ -1.68
OTU1	YFL044C	SSF2	Q12153	453 aa	Predicted RBP	4.56	□□□□□ -1.68
OTU1	YFL044C	TUS1	Q06412	1307 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	TUB2	P02557	457 aa	Known RBP	4.55	□□□□□ -1.68
OTU1	YFL044C	PER1	P25625	357 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	ALG14	P38242	237 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	AMN1	P38285	549 aa	Predicted RBP	4.55	□□□□□ -1.68
OTU1	YFL044C	YIR042C	P40586	236 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	LSB6	P42951	607 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	SOK2	P53438	785 aa	Predicted RBP	4.55	□□□□□ -1.68
OTU1	YFL044C	YNR065C	P53751	1116 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	NSG2	P53898	299 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	PEX13	P80667	386 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	GIS4	Q04233	774 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	CSI1	Q04368	295 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	INM2	Q05533	292 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	SLP1	Q12232	587 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	UBR2	Q07963	1872 aa		4.55	□□□□□ -1.68
OTU1	YFL044C	DAL5	P15365	543 aa		4.54	□□□□□ -1.68
OTU1	YFL044C	SUI2	P20459	304 aa	Known RBP	4.54	□□□□□ -1.68
OTU1	YFL044C	NAR1	P23503	491 aa	Known RBP	4.54	□□□□□ -1.68
OTU1	YFL044C	MDL2	P33311	773 aa		4.54	□□□□□ -1.68
OTU1	YFL044C	PGM2	P37012	569 aa	Known RBP	4.54	□□□□□ -1.68
OTU1	YFL044C	PIC2	P40035	300 aa		4.54	□□□□□ -1.68
OTU1	YFL044C	GIP2	P40036	548 aa		4.54	□□□□□ -1.68
OTU1	YFL044C	YPL034W	Q03083	165 aa		4.54	□□□□□ -1.68
OTU1	YFL044C	THI72	Q08579	599 aa		4.54	□□□□□ -1.68
OTU1	YFL044C	RRI2	Q12348	645 aa		4.54	□□□□□ -1.68
OTU1	YFL044C	ACC1	Q00955	2233 aa	Known RBP	4.53	□□□□□ -1.68
OTU1	YFL044C	YKL077W	P36081	392 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	PEX28	P38848	579 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	TIF4631	P39935	952 aa	Known RBP	4.53	□□□□□ -1.68
OTU1	YFL044C	VPS27	P40343	622 aa	Known RBP	4.53	□□□□□ -1.68
OTU1	YFL044C	PIP2	P52960	996 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	ALG12	P53730	551 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	YNL193W	P53870	558 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	HAS1	Q03532	505 aa	Known RBP	4.53	□□□□□ -1.68
OTU1	YFL044C	MRL1	Q06815	381 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	MET7	Q08645	548 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	CDC53	Q12018	815 aa	Known RBP	4.53	□□□□□ -1.68
OTU1	YFL044C	MDM20	Q12387	796 aa	Known RBP	4.53	□□□□□ -1.68
OTU1	YFL044C	NHA1	Q99271	985 aa		4.53	□□□□□ -1.68
OTU1	YFL044C	MOT1	P32333	1867 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	HTS1	P07263	546 aa	Known RBP	4.52	□□□□□ -1.69
OTU1	YFL044C	CDC34	P14682	295 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
OTU1	YFL044C	MSH3	P25336	1018 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	EUG1	P32474	517 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	UIP5	P36137	443 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	CST26	P38226	397 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	GPB2	P39717	880 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	TED1	P40533	473 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	YNR014W	P53719	212 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	NOG1	Q02892	647 aa	Known RBP	4.52	□□□□□ -1.69
OTU1	YFL044C	SPO71	Q03868	1245 aa		4.52	□□□□□ -1.69
OTU1	YFL044C	RPN7	Q06103	429 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms