RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W NPL4P33755 580 aa2.45□□□□□ -2.02
SIR4YDR227W CAB3P36076 571 aa2.45□□□□□ -2.02
SIR4YDR227W BAP2P38084 609 aa2.45□□□□□ -2.02
SIR4YDR227W YBR184WP38299 523 aa2.45□□□□□ -2.02
SIR4YDR227W GPD2P41911 440 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W ESF2P53743 316 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W TRE2Q08693 809 aa2.45□□□□□ -2.02
SIR4YDR227W RTC5Q12108 567 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W NKP1Q12493 238 aa2.45□□□□□ -2.02
SIR4YDR227W NOP14Q99207 810 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W RIM15P43565 1770 aa2.45□□□□□ -2.02
SIR4YDR227W SWI6P09959 803 aa2.45□□□□□ -2.02
SIR4YDR227W GCD11P32481 527 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W SQT1P35184 431 aa2.45□□□□□ -2.02
SIR4YDR227W HIS6P40545 261 aa2.45□□□□□ -2.02
SIR4YDR227W ACS2P52910 683 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W PEX8P53248 589 aa2.45□□□□□ -2.02
SIR4YDR227W ADA2Q02336 434 aa2.45□□□□□ -2.02
SIR4YDR227W SPO71Q03868 1245 aa2.45□□□□□ -2.02
SIR4YDR227W YDR338CQ05497 695 aa2.45□□□□□ -2.02
SIR4YDR227W SWA2Q06677 668 aa2.45□□□□□ -2.02
SIR4YDR227W CCP1P00431 361 aa2.44□□□□□ -2.02
SIR4YDR227W CIT1P00890 479 aa2.44□□□□□ -2.02
SIR4YDR227W TAF13P11747 167 aa2.44□□□□□ -2.02
SIR4YDR227W PGI1P12709 554 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W PFK2P16862 959 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SIR4YDR227W PHO81P17442 1178 aa2.44□□□□□ -2.02
SIR4YDR227W HSP60P19882 572 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W SMI1P32566 505 aa2.44□□□□□ -2.02
SIR4YDR227W VRP1P37370 817 aa2.44□□□□□ -2.02
SIR4YDR227W VTC3Q02725 835 aa2.44□□□□□ -2.02
SIR4YDR227W CDC73Q06697 393 aa2.44□□□□□ -2.02
SIR4YDR227W MCH5Q08777 521 aa2.44□□□□□ -2.02
SIR4YDR227W FIG2P25653 1609 aa2.44□□□□□ -2.02
SIR4YDR227W TRM1P15565 570 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W YKL069WP36088 180 aa2.44□□□□□ -2.02
SIR4YDR227W SAP190P36123 1033 aa2.44□□□□□ -2.02
SIR4YDR227W EXO84P38261 753 aa2.44□□□□□ -2.02
SIR4YDR227W RSP5P39940 809 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W SPC105P53148 917 aa2.44□□□□□ -2.02
SIR4YDR227W YNL034WP53963 612 aa2.44□□□□□ -2.02
SIR4YDR227W YNL018CP53976 612 aa2.44□□□□□ -2.02
SIR4YDR227W RSM10Q03201 203 aa2.44□□□□□ -2.02
SIR4YDR227W ESF1Q06344 628 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W TRS33Q99394 268 aa2.44□□□□□ -2.02
SIR4YDR227W SST2P11972 698 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W PHO84P25297 587 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W VPS24P36095 224 aaKnown RBP2.44□□□□□ -2.02
SIR4YDR227W KHA1P40309 873 aa2.44□□□□□ -2.02
SIR4YDR227W YPP1P46951 817 aa2.44□□□□□ -2.02
SIR4YDR227W ADH7P25377 361 aa2.43□□□□□ -2.02
SIR4YDR227W GUT1P32190 709 aa2.43□□□□□ -2.02
SIR4YDR227W RGT1P32862 1170 aa2.43□□□□□ -2.02
SIR4YDR227W SRP101P32916 621 aa2.43□□□□□ -2.02
SIR4YDR227W OCT1P35999 772 aa2.43□□□□□ -2.02
SIR4YDR227W MCD4P36051 919 aa2.43□□□□□ -2.02
SIR4YDR227W SAP30P38429 201 aa2.43□□□□□ -2.02
SIR4YDR227W PPE1P38796 400 aa2.43□□□□□ -2.02
SIR4YDR227W LCB2P40970 561 aa2.43□□□□□ -2.02
SIR4YDR227W GPP1P41277 250 aaKnown RBP2.43□□□□□ -2.02
SIR4YDR227W MRPS18P42847 217 aa2.43□□□□□ -2.02
SIR4YDR227W SPO74P45819 413 aa2.43□□□□□ -2.02
SIR4YDR227W SUM1P46676 1062 aa2.43□□□□□ -2.02
SIR4YDR227W CWC22P53333 577 aaKnown RBP2.43□□□□□ -2.02
SIR4YDR227W PEX13P80667 386 aa2.43□□□□□ -2.02
SIR4YDR227W YDR286CQ05530 114 aa2.43□□□□□ -2.02
SIR4YDR227W SNA4Q07549 140 aa2.43□□□□□ -2.02
SIR4YDR227W THI73Q07904 523 aa2.43□□□□□ -2.02
SIR4YDR227W SSP2Q08646 371 aa2.43□□□□□ -2.02
SIR4YDR227W PHM7Q12252 991 aa2.43□□□□□ -2.02
SIR4YDR227W LAM4P38800 1345 aa2.43□□□□□ -2.02
SIR4YDR227W KEX2P13134 814 aa2.43□□□□□ -2.02
SIR4YDR227W KAR2P16474 682 aaKnown RBP2.43□□□□□ -2.02
SIR4YDR227W PRP2P20095 876 aaPredicted RBP2.43□□□□□ -2.02
SIR4YDR227W SWC3P31376 625 aa2.43□□□□□ -2.02
SIR4YDR227W DAL3P32459 195 aa2.43□□□□□ -2.02
SIR4YDR227W SLC1P33333 303 aa2.43□□□□□ -2.02
SIR4YDR227W ESL2P36168 1195 aa2.43□□□□□ -2.02
SIR4YDR227W PTC2P39966 464 aaKnown RBP2.43□□□□□ -2.02
SIR4YDR227W NOP2P40991 618 aaKnown RBP2.43□□□□□ -2.02
SIR4YDR227W NOC3Q07896 663 aaPredicted RBP2.43□□□□□ -2.02
SIR4YDR227W YRR1Q12172 810 aa2.43□□□□□ -2.02
SIR4YDR227W YDL206WQ12424 762 aa2.43□□□□□ -2.02
SIR4YDR227W AI4P03878 556 aa2.43□□□□□ -2.02
SIR4YDR227W NAT1P12945 854 aaKnown RBP2.43□□□□□ -2.02
SIR4YDR227W RAD51P25454 400 aa2.43□□□□□ -2.02
SIR4YDR227W VBA3P25594 458 aa2.43□□□□□ -2.02
SIR4YDR227W MSH1P25846 959 aa2.43□□□□□ -2.02
SIR4YDR227W YJR115WP47152 169 aa2.43□□□□□ -2.02
SIR4YDR227W YGR122WP53272 402 aa2.43□□□□□ -2.02
SIR4YDR227W KIN4Q01919 800 aa2.43□□□□□ -2.02
SIR4YDR227W GAD1Q04792 585 aa2.43□□□□□ -2.02
SIR4YDR227W YLR456WQ06199 204 aa2.43□□□□□ -2.02
SIR4YDR227W OPI10Q08202 246 aa2.43□□□□□ -2.02
SIR4YDR227W BEM3P32873 1128 aa2.42□□□□□ -2.02
SIR4YDR227W PMT3P47190 753 aa2.42□□□□□ -2.02
SIR4YDR227W UME1Q03010 460 aa2.42□□□□□ -2.02
SIR4YDR227W INP2Q03824 705 aa2.42□□□□□ -2.02
SIR4YDR227W TRP2P00899 507 aaKnown RBP2.42□□□□□ -2.02
SIR4YDR227W PWP2P25635 923 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms