RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	CEP3	P40969	608 aa		3.4	□□□□□ -1.86
GCD6	YDR211W	LEM3	P42838	414 aa		3.4	□□□□□ -1.86
GCD6	YDR211W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.86	not detected
GCD6	YDR211W	UBP16	Q02863	499 aa		3.4	□□□□□ -1.86
GCD6	YDR211W	SPO71	Q03868	1245 aa		3.4	□□□□□ -1.86
GCD6	YDR211W	PMT7	Q06644	662 aa		3.4	□□□□□ -1.86
GCD6	YDR211W	OXR1	Q08952	273 aa		3.4	□□□□□ -1.86
GCD6	YDR211W	ERS1	P17261	260 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	PET123	P17558	318 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	OSM1	P21375	501 aa	Known RBP	3.4	□□□□□ -1.87
GCD6	YDR211W	SEC8	P32855	1065 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	MGE1	P38523	228 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	RTT107	P38850	1070 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	YNL193W	P53870	558 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	MEC3	Q02574	474 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	TLG2	Q08144	397 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	TMA16	Q08687	178 aa		3.4	□□□□□ -1.87
GCD6	YDR211W	GLT1	Q12680	2145 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	HTS1	P07263	546 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	SAC7	P17121	654 aa		3.39	□□□□□ -1.87
GCD6	YDR211W	HCA4	P20448	770 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	GDT1	P38301	280 aa	Predicted RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	TCD1	P38756	429 aa		3.39	□□□□□ -1.87
GCD6	YDR211W	SAP1	P39955	897 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	YJR107W	P47145	328 aa		3.39	□□□□□ -1.87
GCD6	YDR211W	ULP1	Q02724	621 aa		3.39	□□□□□ -1.87
GCD6	YDR211W	PKH1	Q03407	766 aa		3.39	□□□□□ -1.87
GCD6	YDR211W	RRB1	Q04225	511 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	ESF1	Q06344	628 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	TY1A-NL1	Q12391	440 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	YKL068W-A	Q3E826	78 aa		3.39	□□□□□ -1.87
GCD6	YDR211W	NOP14	Q99207	810 aa	Known RBP	3.39	□□□□□ -1.87
GCD6	YDR211W	HSP82	P02829	709 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	HXK1	P04806	485 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	TAF13	P11747	167 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	SEC18	P18759	758 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	SPO22	P40511	975 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	BUD6	P41697	788 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	YJR008W	P47085	338 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	YPT11	P48559	417 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	DSE4	P53753	1117 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	VPS60	Q03390	229 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	GYL1	Q04322	720 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	SPR28	Q04921	423 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	MCA1	Q08601	432 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-DR6	P0CX70	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-ER1	P0CX71	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-LR2	P0CX72	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-PL	P0CX73	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-JR1	P0CX74	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-LR3	P0CX75	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-ML2	P0CX76	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	MATALPHA2	P0CY08	210 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	HMLALPHA2	P0CY09	210 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	RPS26A	P39938	119 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	RPS26B	P39939	119 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	SMC3	P47037	1230 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	YKE2	P52553	114 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	YGL140C	P53120	1219 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	YLR407W	Q06070	228 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	COG4	Q06096	861 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-GR1	Q12085	440 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	TY1A-OL	Q92392	440 aa	Known RBP	3.38	□□□□□ -1.87
GCD6	YDR211W	LAM4	P38800	1345 aa		3.38	□□□□□ -1.87
GCD6	YDR211W	AI3	P03877	415 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	VPS1	P21576	704 aa	Known RBP	3.37	□□□□□ -1.87
GCD6	YDR211W	CLB1	P24868	471 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	PEP3	P27801	918 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	DEP1	P31385	405 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	MAE1	P36013	669 aa	Known RBP	3.37	□□□□□ -1.87
GCD6	YDR211W	TAT1	P38085	619 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	YHL017W	P38745	532 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	ECM1	P39715	212 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	SEC9	P40357	651 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	YBP2	P53169	641 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	HDA1	P53973	706 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	PEX13	P80667	386 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	OYE2	Q03558	400 aa	Known RBP	3.37	□□□□□ -1.87
GCD6	YDR211W	ETT1	Q08421	412 aa	Known RBP	3.37	□□□□□ -1.87
GCD6	YDR211W	YIG1	Q08956	461 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	AFT2	Q08957	416 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	TPM1	P17536	199 aa	Known RBP	3.37	□□□□□ -1.87
GCD6	YDR211W	ASF1	P32447	279 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	RPT3	P33298	428 aa	Known RBP	3.37	□□□□□ -1.87
GCD6	YDR211W	EXO5	P38289	585 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	MED8	P38304	223 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	YPL109C	Q02981	657 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	YMR102C	Q03177	834 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	RMT2	Q03305	412 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	SML1	Q04964	104 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	PSK2	Q08217	1101 aa		3.37	□□□□□ -1.87
GCD6	YDR211W	UTP10	P42945	1769 aa	Known RBP	3.36	□□□□□ -1.87
GCD6	YDR211W	SEC65	P29478	273 aa		3.36	□□□□□ -1.87
GCD6	YDR211W	SFA1	P32771	386 aa		3.36	□□□□□ -1.87
GCD6	YDR211W	UTP22	P53254	1237 aa	Predicted RBP	3.36	□□□□□ -1.87
GCD6	YDR211W	NOG1	Q02892	647 aa	Known RBP	3.36	□□□□□ -1.87
GCD6	YDR211W	ADI1	Q03677	179 aa		3.36	□□□□□ -1.87
GCD6	YDR211W	YMR074C	Q04773	145 aa		3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms