RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF853P0CG23 659 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 PDIA6Q15084 440 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 HLFQ16534 295 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 KRT24Q2M2I5 525 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 PRR5LQ6MZQ0 368 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 KIF6Q6ZMV9 814 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 MBIPQ9NS73 344 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 IFT57Q9NWB7 429 aa19.58■□□□□ 0.72
PHGDH-231ENST00000641939 MAP3K15Q6ZN16 1313 aa19.57■□□□□ 0.72
PHGDH-231ENST00000641939 GNAI1P63096 354 aa19.57■□□□□ 0.72
PHGDH-231ENST00000641939 DALRD3Q5D0E6 543 aaKnown RBP19.57■□□□□ 0.72
PHGDH-231ENST00000641939 TTLL7Q6ZT98 887 aa19.57■□□□□ 0.72
PHGDH-231ENST00000641939 CNBD1Q8NA66 436 aa19.57■□□□□ 0.72
PHGDH-231ENST00000641939 NIP7Q9Y221 180 aaKnown RBP eCLIP19.57■□□□□ 0.72
PHGDH-231ENST00000641939 NPHP1O15259 732 aa19.56■□□□□ 0.72
PHGDH-231ENST00000641939 HOXB7P09629 217 aa19.56■□□□□ 0.72
PHGDH-231ENST00000641939 NBPF5PQ86XG9 351 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-231ENST00000641939 BRIP1Q9BX63 1249 aa19.56■□□□□ 0.72
PHGDH-231ENST00000641939 H0YIN7 160 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 PDE6BP35913 854 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 ST5P78524 1137 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 CCDC27Q2M243 656 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 PROSER3Q2NL68 480 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 LRP10Q7Z4F1 713 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 C2CD5Q86YS7 1000 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 CCDC24Q8N4L8 307 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 ZNF784Q8NCA9 323 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-231ENST00000641939 NECTIN2Q92692 538 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
PHGDH-231ENST00000641939 COL11A2P13942 1736 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-231ENST00000641939 ANXA1P04083 346 aa19.54■□□□□ 0.72
PHGDH-231ENST00000641939 ZBTB3Q9H5J0 574 aa19.54■□□□□ 0.72
PHGDH-231ENST00000641939 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
PHGDH-231ENST00000641939 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
PHGDH-231ENST00000641939 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
PHGDH-231ENST00000641939 TPTE2Q6XPS3 522 aa19.53■□□□□ 0.72
PHGDH-231ENST00000641939 DDX21Q9NR30 783 aaKnown RBP eCLIP19.53■□□□□ 0.72
PHGDH-231ENST00000641939 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
PHGDH-231ENST00000641939 HDGFL1Q5TGJ6 251 aa19.52■□□□□ 0.72
PHGDH-231ENST00000641939 ARHGAP27Q6ZUM4 889 aa19.52■□□□□ 0.72
PHGDH-231ENST00000641939 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
PHGDH-231ENST00000641939 GIGYF2Q6Y7W6 1299 aaKnown RBP19.51■□□□□ 0.71
PHGDH-231ENST00000641939 FAM9BQ8IZU0 186 aa19.51■□□□□ 0.71
PHGDH-231ENST00000641939 TTLL6Q8N841 843 aa19.51■□□□□ 0.71
PHGDH-231ENST00000641939 CHPF2Q9P2E5 772 aa19.51■□□□□ 0.71
PHGDH-231ENST00000641939 ANKRD36CQ5JPF3 1778 aa19.51■□□□□ 0.71
PHGDH-231ENST00000641939 CACNA1SQ13698 1873 aa19.51■□□□□ 0.71
PHGDH-231ENST00000641939 FAM177BA6PVY3 158 aa19.5■□□□□ 0.71
PHGDH-231ENST00000641939 AIMP1Q12904 312 aaKnown RBP19.49■□□□□ 0.71
PHGDH-231ENST00000641939 COPS6Q7L5N1 327 aa19.49■□□□□ 0.71
PHGDH-231ENST00000641939 XAGE3Q8WTP9 111 aa19.49■□□□□ 0.71
PHGDH-231ENST00000641939 ZNF622Q969S3 477 aaKnown RBP eCLIP19.49■□□□□ 0.71
PHGDH-231ENST00000641939 NYXQ9GZU5 481 aa19.49■□□□□ 0.71
PHGDH-231ENST00000641939 SBF1O95248 1867 aa19.49■□□□□ 0.71
PHGDH-231ENST00000641939 ADCY9O60503 1353 aa19.48■□□□□ 0.71
PHGDH-231ENST00000641939 ARFGEF2Q9Y6D5 1785 aa19.48■□□□□ 0.71
PHGDH-231ENST00000641939 GPTP24298 496 aa19.48■□□□□ 0.71
PHGDH-231ENST00000641939 GTF2E1P29083 439 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-231ENST00000641939 ZNF34Q8IZ26 560 aa19.48■□□□□ 0.71
PHGDH-231ENST00000641939 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-231ENST00000641939 IL16Q14005 1332 aa19.48■□□□□ 0.71
PHGDH-231ENST00000641939 UBN2Q6ZU65 1347 aa19.47■□□□□ 0.71
PHGDH-231ENST00000641939 SLX4Q8IY92 1834 aa19.46■□□□□ 0.71
PHGDH-231ENST00000641939 IBTKQ9P2D0 1353 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-231ENST00000641939 ELL2O00472 640 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-231ENST00000641939 SRGNP10124 158 aa19.46■□□□□ 0.71
PHGDH-231ENST00000641939 PARP10Q53GL7 1025 aa19.46■□□□□ 0.71
PHGDH-231ENST00000641939 STYK1Q6J9G0 422 aa19.46■□□□□ 0.71
PHGDH-231ENST00000641939 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
PHGDH-231ENST00000641939 MASTLQ96GX5 879 aa19.46■□□□□ 0.71
PHGDH-231ENST00000641939 HYPKQ9NX55 129 aa19.46■□□□□ 0.71
PHGDH-231ENST00000641939 SALL2Q9Y467 1007 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-231ENST00000641939 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
PHGDH-231ENST00000641939 KLRG2A4D1S0 409 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-231ENST00000641939 HSP90AB3PQ58FF7 597 aa19.45■□□□□ 0.7
PHGDH-231ENST00000641939 SUSD4Q5VX71 490 aa19.45■□□□□ 0.7
PHGDH-231ENST00000641939 TSR2Q969E8 191 aaKnown RBP19.45■□□□□ 0.7
PHGDH-231ENST00000641939 CNKSR1Q969H4 720 aa19.45■□□□□ 0.7
PHGDH-231ENST00000641939 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
PHGDH-231ENST00000641939 PPP1R42Q7Z4L9 355 aa19.44■□□□□ 0.7
PHGDH-231ENST00000641939 NUTM1Q86Y26 1132 aa19.44■□□□□ 0.7
PHGDH-231ENST00000641939 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
PHGDH-231ENST00000641939 NPR1P16066 1061 aa19.43■□□□□ 0.7
PHGDH-231ENST00000641939 ERFEQ4G0M1 354 aa19.43■□□□□ 0.7
PHGDH-231ENST00000641939 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
PHGDH-231ENST00000641939 PLBD2Q8NHP8 589 aa19.43■□□□□ 0.7
PHGDH-231ENST00000641939 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
PHGDH-231ENST00000641939 ABCC12Q96J65 1359 aa19.43■□□□□ 0.7
PHGDH-231ENST00000641939 NTSR2O95665 410 aa19.42■□□□□ 0.7
PHGDH-231ENST00000641939 ANKRD13DQ6ZTN6 518 aa19.42■□□□□ 0.7
PHGDH-231ENST00000641939 TSPYL6Q8N831 410 aa19.42■□□□□ 0.7
PHGDH-231ENST00000641939 RIC1Q4ADV7 1423 aa19.42■□□□□ 0.7
PHGDH-231ENST00000641939 TCIRG1Q13488 830 aa19.41■□□□□ 0.7
PHGDH-231ENST00000641939 CCDC30Q5VVM6 783 aa19.41■□□□□ 0.7
PHGDH-231ENST00000641939 C9orf131Q5VYM1 1079 aa19.41■□□□□ 0.7
PHGDH-231ENST00000641939 PRPF40BQ6NWY9 871 aaKnown RBP19.41■□□□□ 0.7
PHGDH-231ENST00000641939 CACNA1FO60840 1977 aa19.41■□□□□ 0.7
PHGDH-231ENST00000641939 C21orf2O43822 256 aa19.4■□□□□ 0.7
PHGDH-231ENST00000641939 NLRP10Q86W26 655 aa19.4■□□□□ 0.7
PHGDH-231ENST00000641939 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms