RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 CHRNA5P30532 468 aa23.12■■□□□ 1.29
PTPN11-207ENST00000639857 PRR5LQ6MZQ0 368 aa23.12■■□□□ 1.29
PTPN11-207ENST00000639857 CFAP44Q96MT7 982 aa23.12■■□□□ 1.29
PTPN11-207ENST00000639857 ATP10DQ9P241 1426 aa23.11■■□□□ 1.29
PTPN11-207ENST00000639857 HOXB7P09629 217 aa23.11■■□□□ 1.29
PTPN11-207ENST00000639857 PDE6BP35913 854 aa23.11■■□□□ 1.29
PTPN11-207ENST00000639857 ST5P78524 1137 aa23.11■■□□□ 1.29
PTPN11-207ENST00000639857 MAP3K15Q6ZN16 1313 aa23.1■■□□□ 1.29
PTPN11-207ENST00000639857 H0YIN7 160 aa23.1■■□□□ 1.29
PTPN11-207ENST00000639857 KIF6Q6ZMV9 814 aa23.1■■□□□ 1.29
PTPN11-207ENST00000639857 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
PTPN11-207ENST00000639857 CCDC184Q52MB2 194 aa23.09■■□□□ 1.29
PTPN11-207ENST00000639857 C2CD5Q86YS7 1000 aa23.09■■□□□ 1.29
PTPN11-207ENST00000639857 SBF1O95248 1867 aa23.09■■□□□ 1.29
PTPN11-207ENST00000639857 NPHP1O15259 732 aa23.08■■□□□ 1.29
PTPN11-207ENST00000639857 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.29
PTPN11-207ENST00000639857 MRS2Q9HD23 443 aa23.08■■□□□ 1.29
PTPN11-207ENST00000639857 NIP7Q9Y221 180 aaKnown RBP eCLIP23.08■■□□□ 1.29
PTPN11-207ENST00000639857 IBTKQ9P2D0 1353 aaPredicted RBP23.08■■□□□ 1.29
PTPN11-207ENST00000639857 MYL6BP14649 208 aa23.07■■□□□ 1.28
PTPN11-207ENST00000639857 NCBP3Q53F19 620 aaKnown RBP23.07■■□□□ 1.28
PTPN11-207ENST00000639857 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
PTPN11-207ENST00000639857 IFT57Q9NWB7 429 aa23.07■■□□□ 1.28
PTPN11-207ENST00000639857 ZNF853P0CG23 659 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 GNAI1P63096 354 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 PDIA6Q15084 440 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 HLFQ16534 295 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 TPTE2Q6XPS3 522 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 ARHGAP27Q6ZUM4 889 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 TTLL6Q8N841 843 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 LAS1LQ9Y4W2 734 aaKnown RBP23.06■■□□□ 1.28
PTPN11-207ENST00000639857 CACNA1SQ13698 1873 aa23.06■■□□□ 1.28
PTPN11-207ENST00000639857 EIF2S2P20042 333 aaKnown RBP23.05■■□□□ 1.28
PTPN11-207ENST00000639857 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
PTPN11-207ENST00000639857 TTLL7Q6ZT98 887 aa23.04■■□□□ 1.28
PTPN11-207ENST00000639857 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
PTPN11-207ENST00000639857 MBIPQ9NS73 344 aa23.04■■□□□ 1.28
PTPN11-207ENST00000639857 RIC1Q4ADV7 1423 aa23.03■■□□□ 1.28
PTPN11-207ENST00000639857 GIGYF2Q6Y7W6 1299 aaKnown RBP23.03■■□□□ 1.28
PTPN11-207ENST00000639857 NYXQ9GZU5 481 aa23.03■■□□□ 1.28
PTPN11-207ENST00000639857 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
PTPN11-207ENST00000639857 STYK1Q6J9G0 422 aa23.02■■□□□ 1.28
PTPN11-207ENST00000639857 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
PTPN11-207ENST00000639857 KLRG2A4D1S0 409 aaPredicted RBP23.01■■□□□ 1.27
PTPN11-207ENST00000639857 SRGNP10124 158 aa23.01■■□□□ 1.27
PTPN11-207ENST00000639857 ZBTB3Q9H5J0 574 aa23.01■■□□□ 1.27
PTPN11-207ENST00000639857 KRT24Q2M2I5 525 aa23■■□□□ 1.27
PTPN11-207ENST00000639857 PROSER3Q2NL68 480 aa23■■□□□ 1.27
PTPN11-207ENST00000639857 HDGFL1Q5TGJ6 251 aa23■■□□□ 1.27
PTPN11-207ENST00000639857 CNKSR1Q969H4 720 aa23■■□□□ 1.27
PTPN11-207ENST00000639857 MASTLQ96GX5 879 aa23■■□□□ 1.27
PTPN11-207ENST00000639857 SLX4Q8IY92 1834 aa23■■□□□ 1.27
PTPN11-207ENST00000639857 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
PTPN11-207ENST00000639857 TNRC6CQ9HCJ0 1690 aaKnown RBP23■■□□□ 1.27
PTPN11-207ENST00000639857 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
PTPN11-207ENST00000639857 CCDC24Q8N4L8 307 aa22.99■■□□□ 1.27
PTPN11-207ENST00000639857 ZNF622Q969S3 477 aaKnown RBP eCLIP22.99■■□□□ 1.27
PTPN11-207ENST00000639857 DBF4Q9UBU7 674 aaPredicted RBP22.99■■□□□ 1.27
PTPN11-207ENST00000639857 DICER1Q9UPY3 1922 aaKnown RBP22.98■■□□□ 1.27
PTPN11-207ENST00000639857 PARP10Q53GL7 1025 aa22.98■■□□□ 1.27
PTPN11-207ENST00000639857 HSP90AB3PQ58FF7 597 aa22.98■■□□□ 1.27
PTPN11-207ENST00000639857 DUSP27Q5VZP5 1158 aa22.98■■□□□ 1.27
PTPN11-207ENST00000639857 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
PTPN11-207ENST00000639857 GTF2E1P29083 439 aaPredicted RBP22.97■■□□□ 1.27
PTPN11-207ENST00000639857 GPBP1L1Q9HC44 474 aaPredicted RBP22.97■■□□□ 1.27
PTPN11-207ENST00000639857 RNF123Q5XPI4 1314 aa22.97■■□□□ 1.27
PTPN11-207ENST00000639857 UBN2Q6ZU65 1347 aa22.97■■□□□ 1.27
PTPN11-207ENST00000639857 ZC3H4Q9UPT8 1303 aaKnown RBP22.97■■□□□ 1.27
PTPN11-207ENST00000639857 ANXA1P04083 346 aa22.96■■□□□ 1.27
PTPN11-207ENST00000639857 NPR1P16066 1061 aa22.96■■□□□ 1.27
PTPN11-207ENST00000639857 SOGA3Q5TF21 947 aa22.96■■□□□ 1.27
PTPN11-207ENST00000639857 COPS6Q7L5N1 327 aa22.96■■□□□ 1.27
PTPN11-207ENST00000639857 NECTIN2Q92692 538 aa22.96■■□□□ 1.27
PTPN11-207ENST00000639857 CHPF2Q9P2E5 772 aa22.96■■□□□ 1.27
PTPN11-207ENST00000639857 TIAM2Q8IVF5 1701 aa22.96■■□□□ 1.27
PTPN11-207ENST00000639857 IL16Q14005 1332 aa22.95■■□□□ 1.26
PTPN11-207ENST00000639857 C9orf131Q5VYM1 1079 aa22.95■■□□□ 1.26
PTPN11-207ENST00000639857 PPP1R42Q7Z4L9 355 aa22.95■■□□□ 1.26
PTPN11-207ENST00000639857 WWC1Q8IX03 1113 aa22.95■■□□□ 1.26
PTPN11-207ENST00000639857 XAGE3Q8WTP9 111 aa22.95■■□□□ 1.26
PTPN11-207ENST00000639857 HYPKQ9NX55 129 aa22.95■■□□□ 1.26
PTPN11-207ENST00000639857 ABCC12Q96J65 1359 aa22.94■■□□□ 1.26
PTPN11-207ENST00000639857 GPTP24298 496 aa22.94■■□□□ 1.26
PTPN11-207ENST00000639857 FAM177BA6PVY3 158 aa22.93■■□□□ 1.26
PTPN11-207ENST00000639857 NTSR2O95665 410 aa22.93■■□□□ 1.26
PTPN11-207ENST00000639857 CRY2Q49AN0 593 aa22.93■■□□□ 1.26
PTPN11-207ENST00000639857 PRPF40BQ6NWY9 871 aaKnown RBP22.93■■□□□ 1.26
PTPN11-207ENST00000639857 CACNA1FO60840 1977 aa22.92■■□□□ 1.26
PTPN11-207ENST00000639857 LTBP3Q9NS15 1303 aa22.92■■□□□ 1.26
PTPN11-207ENST00000639857 LMNB1P20700 586 aa22.92■■□□□ 1.26
PTPN11-207ENST00000639857 SUSD4Q5VX71 490 aa22.92■■□□□ 1.26
PTPN11-207ENST00000639857 PLBD2Q8NHP8 589 aa22.92■■□□□ 1.26
PTPN11-207ENST00000639857 RNF181Q9P0P0 153 aa22.92■■□□□ 1.26
PTPN11-207ENST00000639857 AIMP1Q12904 312 aaKnown RBP22.91■■□□□ 1.26
PTPN11-207ENST00000639857 LAMB2P55268 1798 aa22.91■■□□□ 1.26
PTPN11-207ENST00000639857 NFKBIEO00221 500 aa22.9■■□□□ 1.26
PTPN11-207ENST00000639857 C21orf2O43822 256 aa22.9■■□□□ 1.26
PTPN11-207ENST00000639857 ALDH1B1P30837 517 aa22.9■■□□□ 1.26
PTPN11-207ENST00000639857 TCIRG1Q13488 830 aa22.9■■□□□ 1.26
PTPN11-207ENST00000639857 ERFEQ4G0M1 354 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms