RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TXLNAP40222 546 aa16.92■□□□□ 0.3
SCARB2-216ENST00000639300 NAPBQ9H115 298 aa16.92■□□□□ 0.3
SCARB2-216ENST00000639300 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
SCARB2-216ENST00000639300 ZNF213O14771 459 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 LMBR1LQ6UX01 489 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 BRF1Q92994 677 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
SCARB2-216ENST00000639300 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
SCARB2-216ENST00000639300 NFATC2IPQ8NCF5 419 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 TCEAL9Q9UHQ7 104 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 MTERF4Q7Z6M4 381 aaKnown RBP16.91■□□□□ 0.3
SCARB2-216ENST00000639300 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
SCARB2-216ENST00000639300 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
SCARB2-216ENST00000639300 OFD1O75665 1012 aa16.9■□□□□ 0.3
SCARB2-216ENST00000639300 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
SCARB2-216ENST00000639300 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
SCARB2-216ENST00000639300 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
SCARB2-216ENST00000639300 USP26Q9BXU7 913 aa16.9■□□□□ 0.3
SCARB2-216ENST00000639300 GOLGA8BA8MQT2 603 aa16.89■□□□□ 0.29
SCARB2-216ENST00000639300 CHL1O00533 1208 aa16.89■□□□□ 0.29
SCARB2-216ENST00000639300 GCP02774 474 aa16.89■□□□□ 0.29
SCARB2-216ENST00000639300 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
SCARB2-216ENST00000639300 CNPY2Q9Y2B0 182 aa16.89■□□□□ 0.29
SCARB2-216ENST00000639300 CTDP1Q9Y5B0 961 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-216ENST00000639300 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
SCARB2-216ENST00000639300 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
SCARB2-216ENST00000639300 CFAP100Q494V2 611 aa16.89■□□□□ 0.29
SCARB2-216ENST00000639300 ALDH1L1O75891 902 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-216ENST00000639300 ZSCAN22P10073 491 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-216ENST00000639300 CHMLP26374 656 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 HOXC9P31274 260 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 MAST1Q9Y2H9 1570 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 CPA1P15085 419 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 CCDC144CPQ8IYA2 1237 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
SCARB2-216ENST00000639300 BIN1O00499 593 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 ANAPC15P60006 121 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 UBE2HP62256 183 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 MSH6P52701 1360 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 DTNBO60941 627 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 ADCY5O95622 1261 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 TEX35Q5T0J7 233 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 USP48Q86UV5 1035 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 FSIP1Q8NA03 581 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 PPFIBP1Q86W92 1011 aa16.87■□□□□ 0.29
SCARB2-216ENST00000639300 MAP3K12Q12852 859 aa16.86■□□□□ 0.29
SCARB2-216ENST00000639300 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
SCARB2-216ENST00000639300 CCDC43Q96MW1 224 aaKnown RBP16.86■□□□□ 0.29
SCARB2-216ENST00000639300 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-216ENST00000639300 GCC2Q8IWJ2 1684 aa16.86■□□□□ 0.29
SCARB2-216ENST00000639300 PRIM1P49642 420 aaKnown RBP16.86■□□□□ 0.29
SCARB2-216ENST00000639300 ZNF165P49910 485 aa16.86■□□□□ 0.29
SCARB2-216ENST00000639300 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
SCARB2-216ENST00000639300 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-216ENST00000639300 IFIT3O14879 490 aaKnown RBP16.86■□□□□ 0.29
SCARB2-216ENST00000639300 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
SCARB2-216ENST00000639300 DNM1Q05193 864 aaKnown RBP16.85■□□□□ 0.29
SCARB2-216ENST00000639300 ANO10Q9NW15 660 aa16.85■□□□□ 0.29
SCARB2-216ENST00000639300 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
SCARB2-216ENST00000639300 RBM25P49756 843 aaKnown RBP16.85■□□□□ 0.29
SCARB2-216ENST00000639300 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
SCARB2-216ENST00000639300 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
SCARB2-216ENST00000639300 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-216ENST00000639300 EXOC5O00471 708 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 NMIQ13287 307 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-216ENST00000639300 ZNF830Q96NB3 372 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-216ENST00000639300 EPS15P42566 896 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 AK2P54819 239 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 SMARCE1Q969G3 411 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 PNMA6EA0A0J9YXQ4 647 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 ISM2Q6H9L7 571 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
SCARB2-216ENST00000639300 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 CAGE1Q8TC20 777 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 ZHX3Q9H4I2 956 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
SCARB2-216ENST00000639300 TARBP1Q13395 1621 aaKnown RBP16.83■□□□□ 0.29
SCARB2-216ENST00000639300 HMG20BQ9P0W2 317 aa16.83■□□□□ 0.28
SCARB2-216ENST00000639300 SLC12A7Q9Y666 1083 aa16.83■□□□□ 0.28
SCARB2-216ENST00000639300 WASF1Q92558 559 aa16.83■□□□□ 0.28
SCARB2-216ENST00000639300 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
SCARB2-216ENST00000639300 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
SCARB2-216ENST00000639300 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 TRMT1Q9NXH9 659 aaKnown RBP16.82■□□□□ 0.28
SCARB2-216ENST00000639300 CLIP2Q9UDT6 1046 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
SCARB2-216ENST00000639300 SSBP05455 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms