RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 CAMTA2O94983 1202 aa12.46□□□□□ -0.42
SCARB2-214ENST00000638843 KRT24Q2M2I5 525 aa12.46□□□□□ -0.42
SCARB2-214ENST00000638843 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.42
SCARB2-214ENST00000638843 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
SCARB2-214ENST00000638843 YBX3P16989 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCARB2-214ENST00000638843 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
SCARB2-214ENST00000638843 BICDL1Q6ZP65 573 aa12.45□□□□□ -0.42
SCARB2-214ENST00000638843 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
SCARB2-214ENST00000638843 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
SCARB2-214ENST00000638843 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
SCARB2-214ENST00000638843 WWC3Q9ULE0 1092 aa12.45□□□□□ -0.42
SCARB2-214ENST00000638843 ZNF853P0CG23 659 aa12.44□□□□□ -0.42
SCARB2-214ENST00000638843 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
SCARB2-214ENST00000638843 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 EIF2S2P20042 333 aaKnown RBP12.43□□□□□ -0.42
SCARB2-214ENST00000638843 TGFB2P61812 414 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 SERPINB2P05120 415 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 MYL6BP14649 208 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 PDIA6Q15084 440 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
SCARB2-214ENST00000638843 DPEP1P16444 411 aa12.42□□□□□ -0.42
SCARB2-214ENST00000638843 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
SCARB2-214ENST00000638843 CLEC4GQ6UXB4 293 aa12.42□□□□□ -0.42
SCARB2-214ENST00000638843 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
SCARB2-214ENST00000638843 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
SCARB2-214ENST00000638843 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
SCARB2-214ENST00000638843 ANXA1P04083 346 aa12.41□□□□□ -0.42
SCARB2-214ENST00000638843 KCNA3P22001 575 aa12.41□□□□□ -0.42
SCARB2-214ENST00000638843 HLFQ16534 295 aa12.41□□□□□ -0.42
SCARB2-214ENST00000638843 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
SCARB2-214ENST00000638843 TTLL7Q6ZT98 887 aa12.41□□□□□ -0.42
SCARB2-214ENST00000638843 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
SCARB2-214ENST00000638843 PXDNLA1KZ92 1463 aa12.41□□□□□ -0.42
SCARB2-214ENST00000638843 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
SCARB2-214ENST00000638843 GNAI1P63096 354 aa12.4□□□□□ -0.42
SCARB2-214ENST00000638843 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
SCARB2-214ENST00000638843 SETDB2Q96T68 719 aa12.4□□□□□ -0.42
SCARB2-214ENST00000638843 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
SCARB2-214ENST00000638843 GRIN3BO60391 1043 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 YY1P25490 414 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 CHRNA5P30532 468 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 CCDC24Q8N4L8 307 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-214ENST00000638843 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 DUSP27Q5VZP5 1158 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 CARMIL3Q8ND23 1372 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
SCARB2-214ENST00000638843 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-214ENST00000638843 RGL2O15211 777 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 HOXB7P09629 217 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
SCARB2-214ENST00000638843 ZBTB3Q9H5J0 574 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 NIP7Q9Y221 180 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCARB2-214ENST00000638843 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
SCARB2-214ENST00000638843 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
SCARB2-214ENST00000638843 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
SCARB2-214ENST00000638843 DDX21Q9NR30 783 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCARB2-214ENST00000638843 CHPF2Q9P2E5 772 aa12.37□□□□□ -0.43
SCARB2-214ENST00000638843 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
SCARB2-214ENST00000638843 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-214ENST00000638843 XAGE3Q8WTP9 111 aa12.36□□□□□ -0.43
SCARB2-214ENST00000638843 BRIP1Q9BX63 1249 aa12.36□□□□□ -0.43
SCARB2-214ENST00000638843 PIM2Q9P1W9 311 aa12.36□□□□□ -0.43
SCARB2-214ENST00000638843 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
SCARB2-214ENST00000638843 CD44P16070 742 aaKnown RBP12.35□□□□□ -0.43
SCARB2-214ENST00000638843 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
SCARB2-214ENST00000638843 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
SCARB2-214ENST00000638843 TSPYL6Q8N831 410 aa12.35□□□□□ -0.43
SCARB2-214ENST00000638843 GPTP24298 496 aa12.35□□□□□ -0.43
SCARB2-214ENST00000638843 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
SCARB2-214ENST00000638843 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
SCARB2-214ENST00000638843 IL16Q14005 1332 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 H0YIN7 160 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 NPHP1O15259 732 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 TPTE2Q6XPS3 522 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 ZNF34Q8IZ26 560 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 DBF4Q9UBU7 674 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-214ENST00000638843 SCN7AQ01118 1682 aa12.34□□□□□ -0.43
SCARB2-214ENST00000638843 CCER2I3L3R5 266 aa12.33□□□□□ -0.44
SCARB2-214ENST00000638843 PDE6BP35913 854 aa12.33□□□□□ -0.44
SCARB2-214ENST00000638843 ST5P78524 1137 aa12.33□□□□□ -0.44
SCARB2-214ENST00000638843 LAMB4A4D0S4 1761 aa12.32□□□□□ -0.44
SCARB2-214ENST00000638843 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
SCARB2-214ENST00000638843 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
SCARB2-214ENST00000638843 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
SCARB2-214ENST00000638843 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
SCARB2-214ENST00000638843 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
SCARB2-214ENST00000638843 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
SCARB2-214ENST00000638843 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms