RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 IFT74Q96LB3 600 aa15.04■□□□□ -0
UBE3A-228ENST00000638155 VCXQ9H320 206 aa15.04■□□□□ -0
UBE3A-228ENST00000638155 MCM4P33991 863 aa15.04■□□□□ -0
UBE3A-228ENST00000638155 PFDN4Q9NQP4 134 aa15.04■□□□□ -0
UBE3A-228ENST00000638155 ZMYND15Q9H091 742 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 ERCC6LQ2NKX8 1250 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 UBE2Q2Q8WVN8 375 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 ATP2A2P16615 1042 aaKnown RBP15.03■□□□□ -0
UBE3A-228ENST00000638155 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
UBE3A-228ENST00000638155 SELENOSQ9BQE4 189 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 ZBTB17Q13105 803 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 TTLL12Q14166 644 aaPredicted RBP15.03■□□□□ -0
UBE3A-228ENST00000638155 CTAGE6Q86UF2 777 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 C10orf67Q8IYJ2 551 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 SEPT8Q92599 483 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 FAM177BA6PVY3 158 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 PCK1P35558 622 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 GSTA5Q7RTV2 222 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 CNTLNQ9NXG0 1405 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 CEP85LQ5SZL2 805 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 TMCO4Q5TGY1 634 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 CPLX4Q7Z7G2 160 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
UBE3A-228ENST00000638155 SPTY2D1Q68D10 685 aaPredicted RBP15.03■□□□□ -0
UBE3A-228ENST00000638155 RSPH3Q86UC2 560 aa15.03■□□□□ -0
UBE3A-228ENST00000638155 CCT4P50991 539 aaKnown RBP15.02■□□□□ -0
UBE3A-228ENST00000638155 MAP7Q14244 749 aa15.02■□□□□ -0
UBE3A-228ENST00000638155 CCDC196A0A1B0GTZ2 297 aa15.02■□□□□ -0
UBE3A-228ENST00000638155 SEC62Q99442 399 aaKnown RBP15.02■□□□□ -0
UBE3A-228ENST00000638155 TXNDC16Q9P2K2 825 aa15.02■□□□□ -0
UBE3A-228ENST00000638155 SIL1Q9H173 461 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 A0A087WZG4 1122 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 AMPD3Q01432 767 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 CCDC40Q4G0X9 1142 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 JAKMIP2Q96AA8 810 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 MYO1BO43795 1136 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 TSNAXIP1Q2TAA8 658 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 U3KPZ7 1027 aaPredicted RBP15.02□□□□□ -0.01
UBE3A-228ENST00000638155 BUB1BO60566 1050 aaPredicted RBP15.02□□□□□ -0.01
UBE3A-228ENST00000638155 CRCPO75575 148 aa15.02□□□□□ -0.01
UBE3A-228ENST00000638155 SYCP3Q8IZU3 236 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 TMOD2Q9NZR1 351 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 MCM6Q14566 821 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 KRT13P13646 458 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 CWC27Q6UX04 472 aaKnown RBP15.01□□□□□ -0.01
UBE3A-228ENST00000638155 CEP128Q6ZU80 1094 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 AACSQ86V21 672 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 CPLX3Q8WVH0 158 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 CTAGE9A4FU28 777 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 C1orf115Q9H7X2 142 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 CNNM3Q8NE01 707 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 RBM28Q9NW13 759 aaKnown RBP15.01□□□□□ -0.01
UBE3A-228ENST00000638155 TCERG1LQ5VWI1 586 aa15.01□□□□□ -0.01
UBE3A-228ENST00000638155 ERCC5P28715 1186 aaPredicted RBP15.01□□□□□ -0.01
UBE3A-228ENST00000638155 NACADO15069 1562 aa15□□□□□ -0.01
UBE3A-228ENST00000638155 LRSAM1Q6UWE0 723 aa15□□□□□ -0.01
UBE3A-228ENST00000638155 NCAPGQ9BPX3 1015 aa15□□□□□ -0.01
UBE3A-228ENST00000638155 PYM1Q9BRP8 204 aaKnown RBP15□□□□□ -0.01
UBE3A-228ENST00000638155 NLRP2Q9NX02 1062 aa15□□□□□ -0.01
UBE3A-228ENST00000638155 MRVI1Q9Y6F6 885 aa15□□□□□ -0.01
UBE3A-228ENST00000638155 CNGA1P29973 690 aa15□□□□□ -0.01
UBE3A-228ENST00000638155 GNG11P61952 73 aa15□□□□□ -0.01
UBE3A-228ENST00000638155 CCDC50Q8IVM0 306 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 NEDD9Q14511 834 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 CCT6BQ92526 530 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 AIDAQ96BJ3 306 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 STRN4Q9NRL3 753 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 TACC3Q9Y6A5 838 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 TUBB4BP68371 445 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 INTS8Q75QN2 995 aaKnown RBP14.99□□□□□ -0.01
UBE3A-228ENST00000638155 CA8P35219 290 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 CALML4Q96GE6 196 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 RAB3IPQ96QF0 476 aaPredicted RBP14.99□□□□□ -0.01
UBE3A-228ENST00000638155 CLNS1AP54105 237 aaKnown RBP14.99□□□□□ -0.01
UBE3A-228ENST00000638155 PIP4K2BP78356 416 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 RASSF4Q9H2L5 321 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.99□□□□□ -0.01
UBE3A-228ENST00000638155 LRP2BPQ9P2M1 347 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 GPRASP1Q5JY77 1395 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 ZSWIM4Q9H7M6 989 aa14.99□□□□□ -0.01
UBE3A-228ENST00000638155 DACT3Q96B18 629 aaPredicted RBP14.98□□□□□ -0.01
UBE3A-228ENST00000638155 BICDL2A1A5D9 508 aa14.98□□□□□ -0.01
UBE3A-228ENST00000638155 HMGB1P09429 215 aaKnown RBP14.98□□□□□ -0.01
UBE3A-228ENST00000638155 VPS52Q8N1B4 723 aa14.98□□□□□ -0.01
UBE3A-228ENST00000638155 B4GALNT4Q76KP1 1039 aa14.98□□□□□ -0.01
UBE3A-228ENST00000638155 PHLDB2Q86SQ0 1253 aa14.98□□□□□ -0.01
UBE3A-228ENST00000638155 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
UBE3A-228ENST00000638155 A0A1B0GUL7 405 aa14.98□□□□□ -0.01
UBE3A-228ENST00000638155 ZEB2O60315 1214 aa14.98□□□□□ -0.01
UBE3A-228ENST00000638155 CAVIN2O95810 425 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 GAS8O95995 478 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 CTAGE15A4D2H0 777 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 CTAGE8P0CG41 777 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 CTAGE4Q8IX94 777 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 PPP1R12CQ9BZL4 782 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 PDS5BQ9NTI5 1447 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 ADCY5O95622 1261 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms